Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02240 atgttgCGAGTGAAGGGAGGGAAAAGACCACCTTGGGTGGGACTTGGAGCTGCGGTGTGGGTTCAGATTGCATCAGGAAATGGTTACACTTTCCCTCTCTATTCTCACTCCTTGAAATCCGTTTTGGGTTTCAACCAGAGCCAGATCACCCTCCTTGGTGTTGCCAATGATATTGGTGAGAATGTTGGCATTCTCCCTGGTCTCGCATGCAACAAGCTCCCTCCTTGGCTCATTCTTTTCATCGGTGCTCTCTTTTCTTTCCTTGGTTTTGGTCTTCTCTGGCTTGCCATCAGTAAAACACTTGATTCCCTTCCTTTCTTCTTGCTATGGTTTGCACTTGCTGTTGCTACCAACAGTTGTGCATGGTTATCTACTGGTATCCTTGTCACCAACATGAGAAATTTCCCTGTCAGCAGAGGCACAGTTGCAGGGATACTGAAAGGTTATGCGGGTCTCAGTGCTGCAGTTTTTACTCAAATTTATAGCGTAGTTTTTCATAATTCTTCATCCAAGTTCCTGTTGTTTCTTGCCATTGGTATTCCTGCTTTTTGTTTCAGCACCATGTTTTTTGTCCGGCCCTGTACTCCTGCTTCTGGTGAAGATTCTGCTGAAAAGGGGCATTTTCTTTTCATCCAAGGTGCTAGTGTTGCCTTGGGTTTGTACATACTTGCAACAACAATACTTGACAACTTTCTCCGCATGAGTGATACTGTGTCGTATGTTTTGTTGGCCGTGATGATTCTCCTTCTCTTGGCTCCACTTGCTATCCCTATAAAGATGACACTGTGTCCCAGAAAAGAATCTGCATCAGAAGCTCCAGAGCAACATATTGGATCTTCAGACTTTCTGACTCAAGATGGCAAAGATAAGATAGAGCCCTTGCTATCTTCTTCATCAGCTAGTGGTCTTGGAAGTTTCATTGATGCTGATGGTTCAGCTGAGGTGGCTATGCTTCTTGCTGAGGGTGAGGGAGCAGTGAGGAAGAAGAGAAGGCCTAAAAGAGGGGAGGATTTTAAGTTTACTGAGGCTCTAGTAAAGGCTGATTTCTGGCTACTGTTTTTTGTTTACTTTGTTGGTGTTGGAACTGGGGTTACTGTTCTTAACAATCTGGCTCAGATAGGCATTGCACAAGGTGTGGAAGATACAACTATCTTGCTCTCACTTTTCAGCTTTTTCAATTTTGTGGGCCGGCTTGGCGGAGGAGTTGTTTCAGAACATTTTGTCAGGACAAAAACGATTCCAAGGACAGTTTGGATGACATGCACGCAGATAATTATGATCTTCTTGTACCTTCTGTTTGCCTATGCTATCAATGGAACCCTTTATCCTGCAATAGCAATTCTTGGTATCTGCTATGGCGTGCAATTTTCCATAGTGATTCCCACTGTTTCGGAGCTTTTTGGTTTGAAACACTTTGGTTTACTGATCAACTTCATGTCTTTGGGGAATCCACTCGCTGCATTTCTTTTCTCAGCTCTTCTAGCTGGACGCATATATGACAATGAGGCGGCAAAGCAGCATGGTGTAGGCCTCATTGCTTCAAGTTTTGCATGCATGGGTCCAAATTGTTTCAAGCTCACTTTTTTGACTCTGGCTGGTGTGTGTGTTGCGGGTACCATCTTCAGCATTATCTTGACCATAAGAATTAAGCCCGTTTACCAAATGCTTTATTCCGGGGGTTCTTTTAAGCTACCTCAAACTTCAGGTCACTAA 1713 0.439 MLRVKGGKRPPWVGLGAAVWVQIASGNGYTFPLYSHSLKSVLGFNQSQITLLGVANDIGENVGILPGLACNKLPPWLILFIGALFSFLGFGLLWLAISKTLDSLPFFLLWFALAVATNSCAWLSTGILVTNMRNFPVSRGTVAGILKGYAGLSAAVFTQIYSVVFHNSSSKFLLFLAIGIPAFCFSTMFFVRPCTPASGEDSAEKGHFLFIQGASVALGLYILATTILDNFLRMSDTVSYVLLAVMILLLLAPLAIPIKMTLCPRKESASEAPEQHIGSSDFLTQDGKDKIEPLLSSSSASGLGSFIDADGSAEVAMLLAEGEGAVRKKRRPKRGEDFKFTEALVKADFWLLFFVYFVGVGTGVTVLNNLAQIGIAQGVEDTTILLSLFSFFNFVGRLGGGVVSEHFVRTKTIPRTVWMTCTQIIMIFLYLLFAYAINGTLYPAIAILGICYGVQFSIVIPTVSELFGLKHFGLLINFMSLGNPLAAFLFSALLAGRIYDNEAAKQHGVGLIASSFACMGPNCFKLTFLTLAGVCVAGTIFSIILTIRIKPVYQMLYSGGSFKLPQTSGH 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02240 570 SUPERFAMILY MFS general substrate transporter 11 195 IPR036259 -
Cca11g02240 570 Gene3D MFS general substrate transporter like domains 346 552 IPR036259 -
Cca11g02240 570 CDD MFS_Mch1p_like 10 539 - -
Cca11g02240 570 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 568 - -
Cca11g02240 570 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 568 - -
Cca11g02240 570 SUPERFAMILY MFS general substrate transporter 210 551 IPR036259 -
Cca11g02240 570 Pfam Nodulin-like 11 258 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02240 Cca-Chr11 48630645 48633703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02240 2 570 Nodulin-like Gene Family AT1G80530 57.968 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02240 - - gmx:100787328 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02240 11 48630645 48633703 Cca11g02240 11 48630645 48633703 ECH