Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02168 ATGTCTGGAGGCACAAGAGTTGAAACGAAGCAGATACAACCCGGTGACACACTGCTCCCGAGTACTACTCCTGCTTGGTATTCCCGTTCTGGTGAGTTTGCATTTGGTTTCTATCCGCAAGGGCAAGGCAATGACTTTGTCGTTGCAATTTGGTTGATTTGCGGGAAGAACAAGACAGTGGTATGGACTGCACAGCGGAATGATCCACCGGTCAACTCAAATGCAAAGCTAAAACTAACGATGGATGGCAAAGTCGTACTAATAGACGAGCAAGGAGGGGAGAAGATTATTGCGCGTAATGCTAGTGCGAAAGCTTCCTCTGCCTCCGTGCTTGATTCTGGAAACTTTGTACTATACAACAATAATTCCAGCATCATATGGCAGAGTTTCGATTACCCAACAGATACTTTGTTGGGGGGTCAATCTCTTCTTCCTGATGGACCTCAACTGGTCTCTAGTTCATCGCAGAACAGCCACTCAAGTGGACGGTATCGTCTCAAGATGCAGAATGATGGAAATCTTGTTCTGTATCCAGTAAACACAACTGACACAGCATGGGATGCTTACTGGGCCTCTGAAACTTACAATTTTGGTGTCAAAACTTATCTTTATTTCAACCAAACAGGTTCACTGCAGATCACCAATGGCAGTGAAGGGGGCCTTACGAGGAATCTTATCAGTGACAGTGCTCTATCTTTACCTAAAGAGAACGGGGTTATTTATCGTTCAACCCTGGATTTTGATGGGATATTTCGGATGTATGCGCATTTTATCAATGGTAGTATCCACAAAGTGGGTAACTGGCCGCGGGAAAATAACTGTATAGTAAAAGGTTTTTGTGGCTTCAACAGCTACTGCACAACCAATGACAACCAACCAGTGTGCACTTGTCTTCCGGATTTTGACTTAATATATCCAAACGATTCCACTCTAGGCTGCAAAAGGAGCTTTCACAAAGAAGATTGTACTGCCGAGGTGAATGGGAAAGATAGTGCAACCTTTTATGTGATGAAGCCGGTGGGGGATATGAAGTTGGCGGATCTTCCTTATTTCAAGGCAGAAATGTTACAAGAAGAAGATTGCTCTTCTGCTTGTTCCGCTGATTGCAATTGTGAGGCTGCATTTTATGACGATAAGGACAGAAGCTGCATGAAACACAGGCTGCCTTTGAGATATCTCAGTAGGCCAAAGGATGCTGAAGATAAAGCCTCGTTATTCTTGAAGGTGGGAAACAGGAGTCTCAAGAATGGGACGGGGAATGATGGTCCTGTGCCTCAACAACCACCTCCACCTCCAATCAAGACTACAAGTAACAAAGCAACTGTGCAGATTACTGTCATTACATCCGTGTTTTCTTTGCTTTTGTGTTCGACCCTTGTCATCTCCAGCCATTTCATGTACAAGATTCGGGTATTGAGGTATAAAAGGCTGATGGAGACTGGGAACTTGGGCCTCAATGAAGAGGTGACTTTGAGAAGGTTTTCGTACAGCGAGCTGAAAAGAGCAACGAGTAACTTCAGACAAGAATTGGGAAAAGGATCTTTCGGAGCAGTTTACAAGGGAGAGTTGCACAAGGGTAGGAGGTTGATTGCGGTGAAGAGACTAGAGAAGTTGGTGGAAGAAGGAGAAAGGGAGTTCCAAGCAGAAATGCGAGCCATTGGAAAAACCCACCACAAGAACCTAGTTCGCTTGTTGGGTTTCTGTGCCGAGGGTTCTAAAAGGCTTCTGGTTTATGAGTACATGCCTAATAGCTCCCTTGAAAACGTTATCTTTGGGGCTCACAATCAGAGTCACAGACGCCCCGAGTGGGATGAGAGAGTAAGAATAGCAATTGAGATTGCAAGAGGGATTTTGTATCTCCATGAAGAGTGTGAGGCACCAATCATTCATTGTGACATAAAGCCTCAAAACATTTTGATGGATGAGTTCTACACAGCCAAGATATCTGATTTTGGGCTGGCAAAACTTCTGATGCCAGATCAAACCAGAACCTTCACAGGGGCAAGAGGGACAAGAGGGTACCTGGCCCCTGAATGGAACAAGAACATGCCAATATCTGTCAAGACAGATGTTTATAGCTACGGAATAGTGCTGTTGGAAATATTATGTTGCAGAAGAAATATCGAAGTTCATGTCTCCCAACCTGAGGAGGTTCTCCTCTCCAATTGGGCTTATAAGTGTTTTGTAGCCGGACAGCTTAATAAGCTTTTCCTTTGGGAAGCCGTGGATAAAACTGCGGGGGAAAATATGGTTAAGGTGGCACTTTGGTGTATCCAAGATGAACCTGTTCTGCGTCCAACGATGAAGAGTGTGGTGTTGATGTTAGAAGGGATCACTGATATAGCTATTCCTCCTTGTCCCAATTCTAATTCCATCTGA 2379 0.4456 MSGGTRVETKQIQPGDTLLPSTTPAWYSRSGEFAFGFYPQGQGNDFVVAIWLICGKNKTVVWTAQRNDPPVNSNAKLKLTMDGKVVLIDEQGGEKIIARNASAKASSASVLDSGNFVLYNNNSSIIWQSFDYPTDTLLGGQSLLPDGPQLVSSSSQNSHSSGRYRLKMQNDGNLVLYPVNTTDTAWDAYWASETYNFGVKTYLYFNQTGSLQITNGSEGGLTRNLISDSALSLPKENGVIYRSTLDFDGIFRMYAHFINGSIHKVGNWPRENNCIVKGFCGFNSYCTTNDNQPVCTCLPDFDLIYPNDSTLGCKRSFHKEDCTAEVNGKDSATFYVMKPVGDMKLADLPYFKAEMLQEEDCSSACSADCNCEAAFYDDKDRSCMKHRLPLRYLSRPKDAEDKASLFLKVGNRSLKNGTGNDGPVPQQPPPPPIKTTSNKATVQITVITSVFSLLLCSTLVISSHFMYKIRVLRYKRLMETGNLGLNEEVTLRRFSYSELKRATSNFRQELGKGSFGAVYKGELHKGRRLIAVKRLEKLVEEGEREFQAEMRAIGKTHHKNLVRLLGFCAEGSKRLLVYEYMPNSSLENVIFGAHNQSHRRPEWDERVRIAIEIARGILYLHEECEAPIIHCDIKPQNILMDEFYTAKISDFGLAKLLMPDQTRTFTGARGTRGYLAPEWNKNMPISVKTDVYSYGIVLLEILCCRRNIEVHVSQPEEVLLSNWAYKCFVAGQLNKLFLWEAVDKTAGENMVKVALWCIQDEPVLRPTMKSVVLMLEGITDIAIPPCPNSNSI 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02168 792 CDD STKc_IRAK 510 778 - -
Cca11g02168 792 Gene3D Transferase(Phosphotransferase) domain 1 581 783 - -
Cca11g02168 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 155 219 IPR036426 -
Cca11g02168 792 Gene3D - 132 261 IPR036426 -
Cca11g02168 792 SMART serkin_6 504 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g02168 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Cca11g02168 792 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 15 790 - -
Cca11g02168 792 CDD B_lectin 27 133 IPR001480 -
Cca11g02168 792 ProSitePatterns Protein kinases ATP-binding region signature. 510 533 IPR017441 GO:0005524
Cca11g02168 792 SMART blect_4 15 133 IPR001480 -
Cca11g02168 792 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 790 IPR045874 GO:0004672
Cca11g02168 792 ProSiteProfiles Protein kinase domain profile. 504 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g02168 792 MobiDBLite consensus disorder prediction 414 437 - -
Cca11g02168 792 ProSiteProfiles Bulb-type lectin domain profile. 9 131 IPR001480 -
Cca11g02168 792 SUPERFAMILY Protein kinase-like (PK-like) 488 776 IPR011009 -
Cca11g02168 792 PIRSF SRK 1 792 IPR024171 GO:0004674
Cca11g02168 792 Gene3D - 5 131 IPR036426 -
Cca11g02168 792 Gene3D Phosphorylase Kinase; domain 1 471 580 - -
Cca11g02168 792 Coils Coil 532 552 - -
Cca11g02168 792 Pfam D-mannose binding lectin 59 143 IPR001480 -
Cca11g02168 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 146 IPR036426 -
Cca11g02168 792 Pfam Protein kinase domain 507 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02168 Cca-Chr11 47541243 47543621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02168 420 787 Receptor kinase-like Gene Family AT5G38280 39.362 2.61e-66 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Cca11g02168 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02168 - - gmx:100815958 1190.64