Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02167 ATGGATGTCACTGCTATAACTATCACCTTACTGGTGCTCATGTCTGTAGGCACAAGAGTTGAAATGCATCCTATACAACCCGGTGCCTCACTTCTCCCAAATAGCACTCCTTGTTGGCCTTCCCCTTCTGGAGATTTTGCATTTGGTTTCTATGAGCAAGGCAATGTCTTTGTAATTGCAATTTGGTTGGTTAGCGGGGAGAACAAGACAGTGGTATGGAGTGCAATGCGGGATGATCCTCCTGTCTCGTCAAATGCAAAGCTACAACTAACGATGGATGGTAAAGTCGTACTAATAGATGAGCAAGTAGAAAAGGTTATTGCAGACAATGCTAGTGCAAAAGCTTCCTCTGCCTTCATGCTTGATTCTGGAAACTTTGTACTATACAACAATAATTCCAACGTCATATGGCAGAGTTTCGATCACCCTACGGATACGTTGTTAGGGGGTCAGTATCTTCCTAATGGACATCAACTGGTCTCTAATTTATCTCAGAACAGCCACTCAAGTGGGCGGTTTCGACTCAAGATGCAGAATGATGGAGATCTTGTTCTGTATCCACTGGACACATCTGACACAGAACGGGATGCTTACTGGCAATCTCATACTTCCACTTTTGGTTTCAAAACTCATCTTTATCTCAACCATACAGGTTTACTGCAGATTATGAATGGCAGTGACGGGGGAATTGAGAGTCTAGACTGGTACTCATCTTTGCCTAACGATGGGAGCCGGATCATTTATCGTGCAACCCTGGATTATGATGGGATATTTCGGCTGTATGCTCATTTTAACAACAATGGTAGTATCTACAAAGTGCATAACTGGCCGGCCGAAAATAGCTGTAAAGTAAATGGTTTTTGTGGCTTCAACAGCTACTGCACATTCATTGACACCCAATCACTCGCCGAACAGGTGTGCAATTGTATTTTGGGTTTTAAACCCATAAATCCGAATGACTCCACTCTAGGCTGCAAAAGGAGTTTTCAGAAACAAGATTGTGGCGAGAAAGATAGCGCAACCTTATATGACATGAAGTCGATGCAGAATATGGCGTTGGGGGATGATCCTTATTTCGAAGCTGACATGTCAGAAGAAGACGAATGTTCCTCTACATGCTTGGCTGATTGCAGCTGCGAGGCTGCATTTTATGACGGTGAAAGCTGCATGAAACAGAGGTTACCTTTGAGATATGTTACAAGGAAAGGAGAATATTCTTATAGAGGCACGCTATTCTTGAAAGTGAGAACCAACCTCAAGAACGAGACTAGGAATGATAATCCTGCACCTGAACAACTACCTCCACTGCCACCTCCAATCAAGACTACAAGTAACAAAGCAACGGTGCAGATTATTGTCATTACCTCCGTattttctcttctttcatcttcaacttttttcatcttcatcCATTACATGTACAAGATTCGAGTATTGAAGTATAAAAGGCTGATGGAGACTGGGAACTTGGGCCTCAGTGAAGAGGTGACTTTGAGAAGGTTTTCGTACAGCGAGCTGAAAAGAGCAACGAATAATTTCAAACAAGAGTTGGGAAGAGGATCTTTTGGAGCAGTTTACAAGGGAGGATTGCACAAGGGTAGGAGGTTGATTGCGGTGAAGAGACTAGAAAAGATGGTGGAAGAAGGAGAAAGAGAGTTCCAAGCAGAAATGCGAGCCATTGGAAAAACCCACCACAAGAACCTAGTTCGCTTGTTGGGTTTTTGTGCTGAGGGTTCTAAAAGGCTTCTGGTTTATGAGTACATGCCCAATGGCTCCCTTGGAAACATTATCTTTGGGGCTCACAGTCAGAGTCACAGACGTCCAGAGTGGGATGAGAGAGTAAGAATAGCAATTGAGATTGCAAGAGGGATTTTGTACCTCCATGAAGGGTGTGAGGCACCAATCATTCATTGCGACATAAAGCCTCAAAACATTCTGATGGATGAGTTCTGGACTGCTAAGATATCTGATTTCGGACTAGCCAAACTTCTGATGCCAGATCAAACCAGAACCTTCACAGGGGCTAGAGGGACAAGAGGGTATGTGGCTCCTGAATGGCACAAGAACACCCCAATATCTGTAAAGGCTGATGTGTATAGCTACGGAATAGTGCTGCTGGAAATTTTATGCTGCAGAAGAAACATGGAAGTTCATGTCTCCGAACCTGAGGCAGTTCTTCTCTCCAATTGGGCTTATCAGTGTTTTGTTGCCGGACAGCTTAATAAGCTTCTTCTTTGGGAAGCTGTTGATAAAACTGTAGTGGAAAACATGGTTAAGGTGGCCCTTTGGTGTGTCCAAGATGAACCTGTTCTTCGCCCAGCAATGAAGAGTGTGGTGTTGATGTTAGAAGGGGTCACCGACATAGCAGTTCCTCCTCGTCCCAATTCTAATTCTATGTGA 2400 0.4329 MDVTAITITLLVLMSVGTRVEMHPIQPGASLLPNSTPCWPSPSGDFAFGFYEQGNVFVIAIWLVSGENKTVVWSAMRDDPPVSSNAKLQLTMDGKVVLIDEQVEKVIADNASAKASSAFMLDSGNFVLYNNNSNVIWQSFDHPTDTLLGGQYLPNGHQLVSNLSQNSHSSGRFRLKMQNDGDLVLYPLDTSDTERDAYWQSHTSTFGFKTHLYLNHTGLLQIMNGSDGGIESLDWYSSLPNDGSRIIYRATLDYDGIFRLYAHFNNNGSIYKVHNWPAENSCKVNGFCGFNSYCTFIDTQSLAEQVCNCILGFKPINPNDSTLGCKRSFQKQDCGEKDSATLYDMKSMQNMALGDDPYFEADMSEEDECSSTCLADCSCEAAFYDGESCMKQRLPLRYVTRKGEYSYRGTLFLKVRTNLKNETRNDNPAPEQLPPLPPPIKTTSNKATVQIIVITSVFSLLSSSTFFIFIHYMYKIRVLKYKRLMETGNLGLSEEVTLRRFSYSELKRATNNFKQELGRGSFGAVYKGGLHKGRRLIAVKRLEKMVEEGEREFQAEMRAIGKTHHKNLVRLLGFCAEGSKRLLVYEYMPNGSLGNIIFGAHSQSHRRPEWDERVRIAIEIARGILYLHEGCEAPIIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTGARGTRGYVAPEWHKNTPISVKADVYSYGIVLLEILCCRRNMEVHVSEPEAVLLSNWAYQCFVAGQLNKLLLWEAVDKTVVENMVKVALWCVQDEPVLRPAMKSVVLMLEGVTDIAVPPRPNSNSM 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02167 799 Gene3D - 20 142 IPR036426 -
Cca11g02167 799 ProSiteProfiles Protein kinase domain profile. 511 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g02167 799 SMART serkin_6 511 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g02167 799 CDD STKc_IRAK 517 784 - -
Cca11g02167 799 Gene3D Phosphorylase Kinase; domain 1 489 587 - -
Cca11g02167 799 Gene3D Transferase(Phosphotransferase) domain 1 588 789 - -
Cca11g02167 799 Gene3D - 143 276 IPR036426 -
Cca11g02167 799 PIRSF SRK 1 799 IPR024171 GO:0004674
Cca11g02167 799 Pfam D-mannose binding lectin 70 152 IPR001480 -
Cca11g02167 799 ProSitePatterns Protein kinases ATP-binding region signature. 517 540 IPR017441 GO:0005524
Cca11g02167 799 ProSiteProfiles Bulb-type lectin domain profile. 22 141 IPR001480 -
Cca11g02167 799 ProSiteProfiles Bulb-type lectin domain profile. 144 273 IPR001480 -
Cca11g02167 799 SMART blect_4 30 143 IPR001480 -
Cca11g02167 799 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 19 797 - -
Cca11g02167 799 Pfam S-locus glycoprotein domain 243 315 IPR000858 GO:0048544
Cca11g02167 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Cca11g02167 799 CDD B_lectin 41 143 IPR001480 -
Cca11g02167 799 SUPERFAMILY Protein kinase-like (PK-like) 495 783 IPR011009 -
Cca11g02167 799 Pfam Protein kinase domain 513 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g02167 799 PANTHER RUST RESISTANCE KINASE LR10-RELATED 19 797 IPR045874 GO:0004672
Cca11g02167 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 161 IPR036426 -
Cca11g02167 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 165 262 IPR036426 -
Cca11g02167 799 Coils Coil 539 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02167 Cca-Chr11 47523750 47526199 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02167 476 794 Receptor kinase-like Gene Family AT4G18250 40.785 6.13e-66 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Cca11g02167 Pkinase 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02167 - - gmx:100815958 1162.52