Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02149 ATGGCTTCTTTCTTGAGGAGGTTTGCGAGGGCCACTCCGATCCCATTCGCTGCCCAATCCCACACTAATCTCCGCCTTCCCTTCACCGCCATCGCCGCCATCTCCGCCGGGGTCTCCTTCCTCTACTGCCATTCCTCTCCCGACCTCGTTCATTCTCAACAAACGGAGCAAGAGCAAAGTAAGAATATCGCGCTCGTTCCGGATAAATGGGTCGAGTTTAAGTTGCAGGACACTGCCAGGGTTAGCCACAATACCCAGTTATTCAGGTTTTCATTTGATCCCACTCATAAGTTGGGTTTGGATATTGCTTCTTGCATCCTTACAAGGGCTCCATTGGGACAAGATGCTGAAGGAAAATCAAAATTTGTCATACGCCCGTATACTCCTATTTCAGATCCAGAATCAAAGGGATATTTTGATTTGCTAATCAAGGTGTATCCTGAAGGGAAAATGAGCCAGCATTTTGCAAGCTTAAAACCGGGCGATGTTGTTGAAGTGAAGGGGCCCATTGAAAAGCTCAGATATACTCCTAATATGAAGAAACATATTGGCATGATTGCTGGAGGCACAGGAATTACTCCTATGCTTCAGATAATTGAAGCTATATTGAAGAATCCTGATGACAAAACTCAGATATCATTACTTTATGCTAATGTCTCCCCGGATGACATACTACTTAAACAAAAGCTTGACGTTCTAGCAACAAGCCACCCAAATTTAAAGATATTCTACACTGTTGATAATCCAACAAAAAATTGGAGAGGTGGTGCAGGTTACATATCAAAGGATATGGTTGTGAAAGGCTTACCCGGTCCTAGTGATGATACTCTTATACTTGTGTGTGGACCCCCTGGGATGGTAAAACAAATATCTGGAGAAAAGGCCAAGGACTGGACACAAGGAGAGCTTTCTGGCATCCTAAAAGAGGCTGGATACACTGAACAAATGGTTTACAAATTCTGA 963 0.4393 MASFLRRFARATPIPFAAQSHTNLRLPFTAIAAISAGVSFLYCHSSPDLVHSQQTEQEQSKNIALVPDKWVEFKLQDTARVSHNTQLFRFSFDPTHKLGLDIASCILTRAPLGQDAEGKSKFVIRPYTPISDPESKGYFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYTPNMKKHIGMIAGGTGITPMLQIIEAILKNPDDKTQISLLYANVSPDDILLKQKLDVLATSHPNLKIFYTVDNPTKNWRGGAGYISKDMVVKGLPGPSDDTLILVCGPPGMVKQISGEKAKDWTQGELSGILKEAGYTEQMVYKF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02149 320 PANTHER NADH-CYTOCHROME B5 REDUCTASE-LIKE 41 320 - -
Cca11g02149 320 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 68 176 IPR017927 GO:0016491
Cca11g02149 320 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 125 132 IPR001709 GO:0016491
Cca11g02149 320 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 184 203 IPR001709 GO:0016491
Cca11g02149 320 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 222 233 IPR001709 GO:0016491
Cca11g02149 320 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 277 285 IPR001709 GO:0016491
Cca11g02149 320 CDD cyt_b5_reduct_like 73 320 - -
Cca11g02149 320 PANTHER NADH-CYTOCHROME B5 REDUCTASE 41 320 IPR001834 GO:0016491
Cca11g02149 320 Gene3D - 167 320 IPR039261 -
Cca11g02149 320 Pfam Oxidoreductase NAD-binding domain 185 290 IPR001433 GO:0016491
Cca11g02149 320 Pfam Oxidoreductase FAD-binding domain 73 175 IPR008333 -
Cca11g02149 320 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 162 317 IPR039261 -
Cca11g02149 320 SUPERFAMILY Riboflavin synthase domain-like 63 178 IPR017938 -
Cca11g02149 320 PRINTS Cytochrome B5 reductase signature 125 132 - -
Cca11g02149 320 PRINTS Cytochrome B5 reductase signature 161 175 - -
Cca11g02149 320 PRINTS Cytochrome B5 reductase signature 184 203 - -
Cca11g02149 320 PRINTS Cytochrome B5 reductase signature 222 233 - -
Cca11g02149 320 PRINTS Cytochrome B5 reductase signature 277 285 - -
Cca11g02149 320 Gene3D Translation factors 63 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02149 Cca-Chr11 47339198 47344812 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02149 59 320 NADPH P450 reductases AT5G17770 41.288 2.28e-66 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02149 K00326 - gmx:100781191 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02149 11 47339198 47344812 Cca11g02149 11 47339198 47344812 ECH