Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02135 ATGGAGGACAGAAAGGCTAACACAATCGCTGTTATATCAGTGATTGCAGTGATCATAGTGATCATCGTTGCACGCGTCTCCCTAAAGCTCTCAAGGGCCTTCTTCCTCATATGCGGCGCTTCCATTGCTGTGATCCTCGCTGTCTTCTCGTGCGCGTTCATAAGACACCGTTACAACCGCAGGAGGAGGTTGTTGGAGTCACAGTTGAAGACAGAAGGGAGAGAGCTCCGAATAGAGTACAGTTTCTTAAGAAAGGTCGCTGGTGTTCCAACCAAGTACCGCTACAAGGAGCTTGAAGAAGCAACGGATGGTTTCCAAGCACTCttgggaaaagggtcttcagcttcggtcttcaaaggcattctcagcgacggaacttctgttgcagtgaaaagaatcgacggtgaggagcgtggggagaaggagttcagatcagaagttgcagccattgcaagcgtgcaccatgtcaacctcataattggagggaggaggaaTGTGTCGAGGGTGGAGGATCCGAGGGACAAGAGCAAGAAAAAGTGGGAGTTTTTTCCCAAGATTGTGAATGAGAAAGTGAGGGAGGGGAAGTTGATGGAGATTGTGGATCGTAGGTTGGTGGAGGGAAGGGGTGTTGATGAGAGTGAGGTGAGTAGATTGGTGCATGTTGCATTGTGGTGCATACAAGAGAAGCCAAGGTTGAGGCCTAGCATGGCACAAGTGGTTGATATGCTTGAGGGGCGTGTGAGGGTGGATGAGCCACCTGGCTCAAGAATGATTCTTGTTGATTTGCTTGCTGTTGATGAAGACCCTGCAGATCATAGGAATCTGGCTAGGTTGTTGACCTCTGTGTCCAGCAATGTGGATTGTACATCTACTTACTCCTTGGGAACAGCCACTGTTTTATCTGGTAGATAA 912 0.3958 MEDRKANTIAVISVIAVIIVIIVARVSLKLSRAFFLICGASIAVILAVFSCAFIRHRYNRRRRLLESQLKTEGRELRIEYSFLRKVAGVPTKYRYKELEEATDGFQALLGKGSSASVFKGILSDGTSVAVKRIDGEERGEKEFRSEVAAIASVHHVNLIIGGRRNVSRVEDPRDKSKKKWEFFPKIVNEKVREGKLMEIVDRRLVEGRGVDESEVSRLVHVALWCIQEKPRLRPSMAQVVDMLEGRVRVDEPPGSRMILVDLLAVDEDPADHRNLARLLTSVSSNVDCTSTYSLGTATVLSGR 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02135 303 Gene3D Transferase(Phosphotransferase) domain 1 161 260 - -
Cca11g02135 303 PANTHER RECEPTOR-LIKE KINASE 159 303 - -
Cca11g02135 303 Gene3D Phosphorylase Kinase; domain 1 67 160 - -
Cca11g02135 303 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 159 303 - -
Cca11g02135 303 PANTHER RECEPTOR-LIKE KINASE 1 159 - -
Cca11g02135 303 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Cca11g02135 303 SUPERFAMILY Protein kinase-like (PK-like) 86 159 IPR011009 -
Cca11g02135 303 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02135 Cca-Chr11 47181436 47182782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02135 159 255 Receptor kinase-like Gene Family AT5G20050 62.887 3.83e-24 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02135 - - gmx:100779485 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02135 11 47181436 47182782 Cca03g00753 03 16080079 16081578 PCT