Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02132 ATGGACGACATCTTCTCCTCCCTCAAGCTCCTTTCCCTCTCCTTCATGCTCCTTCTCTTCCTCCTCAAGCTCACTGTCTTGCTCTGGTGGCGTCCCAGAAAAATTCAAGGCCATTTCTCCAAGCAAGGCATCCGAGGCCCCCCCTATCGTTTCTTCATTGGAAACGTCAAGGAACTAGTCTCCATGATGCTCAAAGCCTCTTCCCAACCCATGCCTTTCTCTCACAACATTCTCCCCAGAGTCCTCTCCTTCTACCATCACTGGAAGAAAATTTATGGGGCAAAATTCCTAGTTTGGTTTGGACCCACAGTTCGTCTGACCGTCTCTGATCCAGACCTCATCCGGGAAATCTTCACATCCAAGTCAGAATTTTACGAGAAAAACGAAGCTCCACCCCTGGTGAAGCAGCTAGAAGGTGATGGGCTCCTTAGCCTGAAAGGAGAAAAATGGGCTCACCACCGAAAAATCATCTCTCCCACTTTTCACATGGAAAATCTCAAATTACTGATACCGGTAATGGCAAGAAGCGTGGTTGAGATGTTGGAAAAGTGGTCGGCAATGGGTGAGAAGGGTGAGGTGGAAATCGAAGTTTCGGAGTGGTTTCAAACCCTAACCGAAGACGTGATTACGAGGACAGCGTTTGGAAGCAGCTACGAAGATGGGAAAGCCATTTTCCGTCTGCAAGGCGAACAAATGGACTTAGCCGCGGATGCTTTTCAAAAAGTATTCATTCCAGGTTACAGATTCTTTCCGACATGGAGGAATATAAAATCTTGGAAATTGGACAAGGAAATAAAGAAATCGCTGGTGAAGCTGATCGAACGACGGAGAGAGAATTGGAGGAATGGAGAGGAAAAGGGTAGAAAGGATTTGTTGGGGCTAATGATTGAAGCCTCGAACATGAATTCGTCGAATGTCACAGTGGATGACATGGTGGAAGAGTGCAAGAGCTTTTTCTTTGCAGGCAAACAGACCACATCCAACCTGCTGACGTGGACCAGCATTCTCCTTGCTATGCACCCACAGTGGCAGGTAGAGGCACGTGAGGAGGTTCTGAATATGTGTGGAGCACGTGACCTCCCCACCAAAGACCATGTTGCAAAGCTAAGGACGCTGAACATGATTGTAAACGAGTCCCTGAGGCTGTACCCGCCGACGATCGCCACAATCAGACGGGCCAAAACGGACGTGGAGTTGGGGGGGTACAAGATACCACGTGGGACGGAGCTGCTGATTCCAATCGTGGCCGTCCATCACGATCAAGCGATATGGGGGAACGATGCGAACGAATTCAATCCTGGGCGTTTCTCCTCGGGGGTGGCCCGCGCGGCGAAGCATCCATTGGCCTTCATACCGTTCGGTCTGGGTGTGCGCACATGCATCGGACAAAACCTCGCAGTGCTCCAAACCAAACTGGCCCTCGCAATCATACTGCAGCGTTTTAGTTTCAGGTTGGCCCCTAGTTATCAGCACGCACCAACGGTCCTGATGCTACTCTATCCTCAGTACGGCGCACCAATCATTTTCCAACACTTGTCACCACCGGATCCTCATCATCACTATATATCTTCCTTTTCCTATAATTTATAA 1590 0.495 MDDIFSSLKLLSLSFMLLLFLLKLTVLLWWRPRKIQGHFSKQGIRGPPYRFFIGNVKELVSMMLKASSQPMPFSHNILPRVLSFYHHWKKIYGAKFLVWFGPTVRLTVSDPDLIREIFTSKSEFYEKNEAPPLVKQLEGDGLLSLKGEKWAHHRKIISPTFHMENLKLLIPVMARSVVEMLEKWSAMGEKGEVEIEVSEWFQTLTEDVITRTAFGSSYEDGKAIFRLQGEQMDLAADAFQKVFIPGYRFFPTWRNIKSWKLDKEIKKSLVKLIERRRENWRNGEEKGRKDLLGLMIEASNMNSSNVTVDDMVEECKSFFFAGKQTTSNLLTWTSILLAMHPQWQVEAREEVLNMCGARDLPTKDHVAKLRTLNMIVNESLRLYPPTIATIRRAKTDVELGGYKIPRGTELLIPIVAVHHDQAIWGNDANEFNPGRFSSGVARAAKHPLAFIPFGLGVRTCIGQNLAVLQTKLALAIILQRFSFRLAPSYQHAPTVLMLLYPQYGAPIIFQHLSPPDPHHHYISSFSYNL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02132 529 SUPERFAMILY Cytochrome P450 39 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02132 529 Gene3D Cytochrome P450 29 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02132 529 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02132 529 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02132 529 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02132 529 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02132 529 Pfam Cytochrome P450 82 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02132 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Cca11g02132 529 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02132 529 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02132 529 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02132 529 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02132 529 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02132 529 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02132 529 PANTHER CYTOCHROMEA2 10 507 - -
Cca11g02132 529 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02132 Cca-Chr11 47134541 47137686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02132 9 513 Cytochrome P450 AT2G26710 77.691 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02132 K15639 - gmx:100780027 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02132 11 47134541 47137686 Cca11g02132 11 47134541 47137686 ECH
Cca03g00747 03 15513018 15517294 Cca11g02132 11 47134541 47137686 PCT