Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02073 ATGGAGATTACTACCATGGCTTCTTCGGCCACTCCAAGACCTCCTTCTCCACACGCAGTAGTCACCACCTTCAACAAGCCTCAACCAAGACGCGTCCACGTGGCACTTCCAACCTCAACCACCATTTCACTCCTCGCTCTCTTCGCCCCTCCCAACGAAGCCAAAGCCATCGCCAAGGACCAGATTGTCTCTTCTCTCACCCAAGTGGAGAAAACCATCGACCAGGTTCAGGAAGTGGGTTCGAGCGTGTTTGACACGGCGCAGCGTGTTGCTGAGGTTATAGGGAACGCTTTGAAGCCTGGCATCGAGACGGCGTTGCCGATTGTGCAGCAGGCTGGGGAAGAGGCCTTCAAAATTGCTTCCCCTGCCATCTCCGAAGCTTCCAAGAAGGCACAAGAAGCGCTTCAAAGCTCCGGTGTCGATACCGAACCTGTTCTTACTGCTGCTAAGACAGTGGCAGATGCTGCACAACAAACGACCAAGGTGATTGAAGTTGCCAAACCTATAGCTTCATCAACCGTCGAAACCATATCTTCTTCAGATCCTACTGTGATTGCTGGAACAGCTGGAGCACTATTTGTTGCTTACCTCCTGATTCCTCCTATTTGGTCTGCCATCTCTTCTAATCTTCGTGGTTACAAAGGAGACCTGACTCCTGCTCAAGCCCTTGATTTGATATCAACGCAAAGCTACGTTTTGGTTGATATTAGGTCAGAGAAGGATAAGGACAAGACTGGTATCCCTCGCCTTCCCTCTAGTGCTAAAAACAGGATGGTTGCTATTCCTTTGGAAGAACTGCCAAGCAAGCTCAAAGGGCAGGTAAAGAATGTGAAGAAATTGGAAGCTGAAGTAGTCGCTTTGAAGATTTCATATCTCAAGAAAATCAACAAAGGCAGCAACGTTGTGATCTTGGACTCGTACTCGGACGTAGCAAAAATAGTTGGAAGAACGCTAACCAGCCTTGGATTTAAGAACACGTGGATTGTTGCTGATGGATTCTCTGGGGGCAAAGGGTGGTTACAGAGTAGATTAGGAACAGATTCGTATAACTTTTCGTTCGCAGAGGTGCTGTCACCATCCAGGGTCATCCCTGCGGCTGTGAGAAGTTTTGGCACAACCAGCAATTCTAGAACCAAGCTTCTTCCTGGGGCTGACTAA 1158 0.4888 MEITTMASSATPRPPSPHAVVTTFNKPQPRRVHVALPTSTTISLLALFAPPNEAKAIAKDQIVSSLTQVEKTIDQVQEVGSSVFDTAQRVAEVIGNALKPGIETALPIVQQAGEEAFKIASPAISEASKKAQEALQSSGVDTEPVLTAAKTVADAAQQTTKVIEVAKPIASSTVETISSSDPTVIAGTAGALFVAYLLIPPIWSAISSNLRGYKGDLTPAQALDLISTQSYVLVDIRSEKDKDKTGIPRLPSSAKNRMVAIPLEELPSKLKGQVKNVKKLEAEVVALKISYLKKINKGSNVVILDSYSDVAKIVGRTLTSLGFKNTWIVADGFSGGKGWLQSRLGTDSYNFSFAEVLSPSRVIPAAVRSFGTTSNSRTKLLPGAD 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02073 385 PANTHER CALCIUM SENSING RECEPTOR, CHLOROPLASTIC 6 383 - -
Cca11g02073 385 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 193 335 IPR036873 -
Cca11g02073 385 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 6 383 IPR044690 GO:0009704|GO:0071277|GO:0090333
Cca11g02073 385 CDD RHOD 221 335 - -
Cca11g02073 385 Gene3D - 214 353 IPR036873 -
Cca11g02073 385 ProSiteProfiles Rhodanese domain profile. 227 348 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02073 30 306 Sulfurtransferasese or Rhodanese AT5G23060 72.954 1.19e-146 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02073 - - gmx:100813363 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02073 11 46309972 46313375 Cca11g02073 11 46309972 46313375 ECH