Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02058 ATGAAAACTCGAGACATGGAAGGCAATGTAGATAATGAACTCCATGTATCACCTTATGCTTCCTTAACACAGTGCCTTCACTATCCTTCTGCAACCCAGAAACCTATCATGGCCTCAACAAACCTCCTGAACATGGAAGCTAGGGAAGGCCCTATGGATCCACCTCATAGTTTACATCATGTTCCATTTTTGTACTCCCAACTTCACCTTCCTAGCATTAACAACAACCCAATTCAATTGCCACTCCATAAATCCTCTCCAAACACATCATCAAACAGTAACAACAACAACTCTGATGAAGCAAAGGCTCTCCTTGATGACAGAAAGAAGAAGAGGATGTTCTCCAACAGAGAATCTGCTCGAAGGTCACGGATGCGAAAGAAGCAACAAATTGAAGTCCTGCAGTATCATGTGGATCATCTGCAGACATTGAACCATCAACTCTCACAAAAGATCATTTACTTGTTGGAATGTAACCAACAAATTAACCAACATAATGCTCAGCTAAAAGAGAAAGTTTCTACTCTTCAGGTAGCACTTTCTGAACTGTTAGTTCCTGCTGGAAGTGCTGAGCAACATCACCACATCCCTAATGGCTTCCTTGACGAGTCTTCAACTCGACCAATTGCAAGCTCCAGAGCGTAG 645 0.4248 MKTRDMEGNVDNELHVSPYASLTQCLHYPSATQKPIMASTNLLNMEAREGPMDPPHSLHHVPFLYSQLHLPSINNNPIQLPLHKSSPNTSSNSNNNNSDEAKALLDDRKKKRMFSNRESARRSRMRKKQQIEVLQYHVDHLQTLNHQLSQKIIYLLECNQQINQHNAQLKEKVSTLQVALSELLVPAGSAEQHHHIPNGFLDESSTRPIASSRA 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02058 214 MobiDBLite consensus disorder prediction 193 214 - -
Cca11g02058 214 Gene3D - 107 161 - -
Cca11g02058 214 MobiDBLite consensus disorder prediction 76 100 - -
Cca11g02058 214 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 111 126 IPR004827 GO:0003700|GO:0006355
Cca11g02058 214 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 106 169 IPR004827 GO:0003700|GO:0006355
Cca11g02058 214 Coils Coil 159 179 - -
Cca11g02058 214 SMART brlzneu 104 168 IPR004827 GO:0003700|GO:0006355
Cca11g02058 214 CDD bZIP_plant_GBF1 109 157 IPR045314 GO:0003700|GO:0006355
Cca11g02058 214 MobiDBLite consensus disorder prediction 101 126 - -
Cca11g02058 214 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 6 207 IPR044521 -
Cca11g02058 214 MobiDBLite consensus disorder prediction 76 126 - -
Cca11g02058 214 SUPERFAMILY Leucine zipper domain 108 159 IPR046347 GO:0003700|GO:0006355
Cca11g02058 214 PANTHER BASIC LEUCINE-ZIPPER 70-RELATED 6 207 - -
Cca11g02058 214 Pfam bZIP transcription factor 108 165 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02058 106 191 bZIP Transcription Factor Family AT5G60830 58.140 9.08e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca11g02058 bZIP_1 2.8e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02058 - - gmx:102664001 313.923