Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02039 ATGTCTTTCGAACTCTACTCTTTGTTTCTGCCACTATCTACGTGCTCAACAATACTGAGTCTTGATGTCCTTCTTGGACTCCTTTTTTTTGTGGGCGTGTTGGGCTACTGGCTTGCTCCCGGTGGTCTTGCATGGGCCTTATCTAAGTTTAGAGTGGGAACAGCTCTAAACAACAAAGCTTCCATTCCAGGACCTTCCGGTTACCCGGTGGTGGGCCTGGTTCCGGCTTTCACAGGGCCTCTTACCCACAGAGTCCTTGCTAAGTTAGCTCAGGCTTTTGATGCCAAGCATTTGATGGCTTTTTCCGTGGGCTTCACTCGTTTCATAATCTCTTCTCACCCGGACACTGCCAAAGAGATTTTGAATAGTCCCTCTTTTGCTGATCGTCCTGTTAAGGAATCAGCCTACGAGCTTCTCTTCCATCGTGCAATGGGGTTCGCGCCATACGGGGAGTACTGGAGGAACCTCAGAAGGATTTCCGCGACTCACATGTTCTCTCCGAGGAGGATTGCTGCATCCGGAGTGTTCCGAGCAAGGGTAGGGGCCCAAATGGTGAGGGACATCACGGGCCTCATGGGGAAACATGGTGAGGTGGAGGTGAGGAAGGTGTTGCATTTTGGGTCCCTTAACAACGTGATGATGAGCGTGTTTGGGAGGAGTTACGTGTTTGGTGAGGGGGGTGATGGGTGTGAGCTTGAGGAGTTGGTGAGTGAGGGGTATGATTTGCTTGGAGTGTTTAACTGGAGTGACCACTTCCCTTTGTTGGGTAGGTTGGACTTGCAAGGAGTGAGGAAAAGGTGCAGGAATCTAGTGGATAGAGTGAATGTATTTGTGGGGAAAATCATATTGGAACATAGACTCAAGAGGGCTGCTAAAGGTGAGAATAAAGTTAGGGATGTTGAAAGCTTTGGTGACTTCGTTGATGTGCTGCTAGAGATGGAGAAGGAAAGTAAGCTTCAACACTCTGATATGGTTGCTATCTTGTGGGAAATGATATTTAGGGGGACTGACACAGTGGCAATCCTTCTAGAGTGGATTCTTGCTAGGATGGTTTTGCACCCTGAAATCCAAGCCAAGGCTGGGGCTGAAATAGACTCTATTGTTGGGTGTGGGCGCAATGTGAGCGACGATGACCTTCCTAACCTTCCTTACGTGCGTGGCATAGTGAAGGAAGCCCTGAGGATGCACCCACCGGGCCCTCTCCTTTCGTGGGCTAGGCTTTCCATCCATGACACGCACATTGGAAACCACTTCGTTCCTGCGGGCACCACTGCAATGGTTAACATGTGGGCTATCACTCACGACCAGGAGGTTTGGTCGGAGCCGGAAGTGTTCAAGCCAGAGCGTTTTGTGGATGTTCCAATCAACATTATGGGGTCCGATCTAAGGTTGGCACCTTTTGGATCTGGGAGAAGGGTGTGCCCTGGAAAAGCGATGGGCTTGGCCACTGTTGAGCTTTGGCTTGCTATGCTCCTCCATAACTTTGAATGGATGCCACCAGATTCTTCTGCTGTTGTTGACTTGTCTGAGTGCTTAAAACTCTCAATGGAAATGAAACGACCTCTCCTCACCAAACCTATTCCCAGgcttctcctcgctgctgctactactgcttctgcttctgcttctTGTGTAAACAATGTTGGCTAA 1650 0.483 MSFELYSLFLPLSTCSTILSLDVLLGLLFFVGVLGYWLAPGGLAWALSKFRVGTALNNKASIPGPSGYPVVGLVPAFTGPLTHRVLAKLAQAFDAKHLMAFSVGFTRFIISSHPDTAKEILNSPSFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATHMFSPRRIAASGVFRARVGAQMVRDITGLMGKHGEVEVRKVLHFGSLNNVMMSVFGRSYVFGEGGDGCELEELVSEGYDLLGVFNWSDHFPLLGRLDLQGVRKRCRNLVDRVNVFVGKIILEHRLKRAAKGENKVRDVESFGDFVDVLLEMEKESKLQHSDMVAILWEMIFRGTDTVAILLEWILARMVLHPEIQAKAGAEIDSIVGCGRNVSDDDLPNLPYVRGIVKEALRMHPPGPLLSWARLSIHDTHIGNHFVPAGTTAMVNMWAITHDQEVWSEPEVFKPERFVDVPINIMGSDLRLAPFGSGRRVCPGKAMGLATVELWLAMLLHNFEWMPPDSSAVVDLSECLKLSMEMKRPLLTKPIPRLLLAAATTASASASCVNNVG 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02039 549 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Cca11g02039 549 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02039 549 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02039 549 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02039 549 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02039 549 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02039 549 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02039 549 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02039 549 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02039 549 SUPERFAMILY Cytochrome P450 62 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02039 549 Gene3D Cytochrome P450 53 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02039 549 Pfam Cytochrome P450 63 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02039 549 PANTHER STEROID 21-HYDROXYLASE-RELATED 17 526 - -
Cca11g02039 549 PANTHER CYTOCHROME P450 78A5 17 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02039 Cca-Chr11 45882387 45884363 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02039 1 529 Cytochrome P450 AT1G74110 63.771 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02039 K20619 - gmx:100811042 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02039 11 45882387 45884363 Cca11g02039 11 45882387 45884363 ECH