Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02031 ATGGCAACAAAACTCTTGCATTCTTTAGCAGATGACAACCCAGATTTACAAAAGCAGATAGGATGCATGAGTGGGGTTTTCCAACTCTTTGATCGTCACCAAATTGTTCCTGCTCGCCGCATTAGCCCGAAGAGGCTTCCTTCAGGTATTTCCCACCTCAATTATGACAGCCTAGAAAGAGGTTCTAATGATGTACACCAACGACAATCGGCATCTGATAAGAGGGGTGTGAGTGAAAAACAAAGAATTTCAACCGAATCATCAAGAACATCATTTTCTTCTTCTTGTTCATCATCAATGTCCTCTTTGGATAATAAAGCTCAAGCAGATGCTCCCTTTGACCGAATTGTTTATCCTAAATCTCCTATGAGGTACCCAGTTATGAACCAAACTAGTACCTCTTCCCATTTAGGATCTCACTCCCTTGACCTGAGGGATGTGGTGAAGGACTCTATGTATAGGGAGGCCAGAGGACTATCCAAAGAAAGGGATTCCCCAAGACATTTTCCACTGTCCAAATCTGTTGAAGGAAAACAAAACACGCCTATTGATCTAAAGGAAACCCTGCAAGTCCTTGCCAAACTCAGAGAAGCACCTAGGCATTATGTTGAGGCTAAAGAACTTCCAAGATTATCATCTGAAGTAAAAGATGGACAGTGGCATTCCATCTCAAAGGATGCTCCTAGGTTTTCTTATGATGGAAAAGAAACAAGAGGTATATCTTTTGAATCACAATGTACCATCAAATGCTCACCTAAGCTAAAAGAGCTTCCTAGACTTTCACTTGACGGTAGGGAAGGTTCATGGCACACACACATCTCTGATTCAAAACCAAGTTATCTCTCAAGAAATTTCAATGTAGGTGGTGCCTCCACATCTGTTGACAATATTTCTAGTCCACAACATCCTTCAGCATCCCAGGGCCGGCCACCTAGTGTTGTAGCAAAATTAATGGGCTTGGAAGCATTGCCAGAATCCTATATAGCCAGTGATACTATGTCAAGTCTGAGTAGTGAAAATGGCTCAACACAAAGTAATGATCAGTTTATGAAAAATGGACTCTTCAGGCCACTTGGAGCTTCTAATTCCCCCAAAATCTCGTTGAAAGACACCACTTCGCCACGGTGGAAGAATCCTGATTTGGCTGGGAAACCAATCTTAAGTTCAAGGCTTCCCATTGAACCAGCACCTTGGAAGCAGCAGGATGGAAACCAAAGCTCTGAGAGACTAACTTCCAGGGCCATAAAAGCTACAGCAAGAACACCAGATTCATTTCCTTCAGTTTACAGTGAGATTGAGAAGAGATTGAGTGATCTTGAATTTAAACAATCTGGAAGGGATCTCAGAGCACTCAAACGGATACTGGAAGCAATGCAAGTAAAGGGACTATTAGAGACCAGAAAAGAAGAACAAGCTTCAAATGTTGGAAATAAAAGAGACTTTGAACTAAAACCGAGTCCAATTCAGCATTCTATTTCATCAAGGCAACAAACAATCAGTGGATCTGCCTCTGCAAGGGCTTTAGAATCACCAATTGTGATCATGAAACCGGCAAGACTTATTGAGAAAACTGGAATTTCTGATTCTTCAGTCTTTCCAATTGGAGGACTTTCTAATTCCCATAAACTTCAGAGTGGTGCTTTACATGCACATGATAAAAAGGAGTCGACATCCGGTCAAATAGCAAAGGATCAATCTCTTAAAACCAGTTATAGGGATGCTTCTACAAGTTTTAGTGAAAGGAAAGAAAATAGTATCAAGACTACAAAATCAGCACAATCTCAACAAAGGTCTAAACAATTTCCAAAAGAAAATGGCTCAAGTTCAGTAAGGAATTCAGGATCTGTTAGCCCAATAATGCAACAGAAGAAGATGGAGTCAGAGAAGAAATCTTGCCTGCCATCCTCACCATCAGATTCAAATAAATCCAGAAGGCAGTCCTATAAGCAGACAACAGAATCACGTTCTCCCAGTCGAAAACTGAGACCTAAAGTCCATAATCCACAGTACAGTGATGACCAACTTAGTGAGACTAGCAATGAATTGAGAAGTTTAAGTTGCCAATGGGATGAAATATCTCTGCAATCAGATACTATCACTGTCGACTCAAAGATGGATATTGAAGTCACTAGCAGTTTACAATCTGCTGAAATTATTGATAGCCATAGCCCATCTATGAAGGCTATTGAGCATTTGGTTTCAGGATCAATGCAGACGAAATCAACTATGAGGTGGGATGGGTATGAGTCAATTGCAGAACTTGCAACGGATGCCCCTGATCATCCAAGTCTTGATTCAGTTCTTGATGACTCAGTATATAAATATGATATGTCATCCCTAGTAAATCGTACATCCAATGCTCCTAAAGTTGATAATGCTCAAGAATCTAAAGAAAATGATAATACAGATCAGTGGAACCATGCAGATGGCTTCTTCATTATCAACACAAGATATAGAGAGATCAACCGCAAGAAATTGCAAAGCATAGATCGCCTTATTCAAAAGCTTAGACAGCTAAACTCAAGTCATGATGAAACTAGAATCGATTACATAGCTTCCCTTTGTGAAAATACAAATCCAGACCACAGATACATTGCTGAAATACTATTAGCTTCAGGTCTACTACTGAGAGCTATGAGTTCTGAGTTGCTGACATTTCAAAATTACTCATCAGTTCTTCCCATTAACCCTGAGTTATTCTTAGTGTTGGAGCAGATCAAGTTAAGTAGTTTCCTTTCAAAAGAAGAAACCAGCCTTGGAAAAGTTGCTTGCATGAAGCTAAATACAGAGAAGTGGCACAGGAAACTCATCTTTGATGCTGTGAATGAGATTCTTGGTGAAAAATTAGGCTCTTTTCTTGAGCCATGGTTGAAGCATAATGGGCTAGCAACAAAATTTGTCAGTGCACAAAAGCTTCTTAAAGAACTTTGCTTTGAGATACAAAAACTTCAACCTTTGAAGGCAGATTGCTGTTTAGAAGATGAAGGGGATGGTCTGAAAAGTATGTTATGGGAAGATGTGATGCGTCACTCAGTAAGATGGACAGATTTCCCTAGTGAATTACCTGGGGTTGTGTTGGATGTCGAGAGACTGATATTTAAGGACTTAGTTGATGAGTTTCTGATTGATGAAGTTGCTAGTTTGCGAGTGAAGTAG 3156 0.4011 MATKLLHSLADDNPDLQKQIGCMSGVFQLFDRHQIVPARRISPKRLPSGISHLNYDSLERGSNDVHQRQSASDKRGVSEKQRISTESSRTSFSSSCSSSMSSLDNKAQADAPFDRIVYPKSPMRYPVMNQTSTSSHLGSHSLDLRDVVKDSMYREARGLSKERDSPRHFPLSKSVEGKQNTPIDLKETLQVLAKLREAPRHYVEAKELPRLSSEVKDGQWHSISKDAPRFSYDGKETRGISFESQCTIKCSPKLKELPRLSLDGREGSWHTHISDSKPSYLSRNFNVGGASTSVDNISSPQHPSASQGRPPSVVAKLMGLEALPESYIASDTMSSLSSENGSTQSNDQFMKNGLFRPLGASNSPKISLKDTTSPRWKNPDLAGKPILSSRLPIEPAPWKQQDGNQSSERLTSRAIKATARTPDSFPSVYSEIEKRLSDLEFKQSGRDLRALKRILEAMQVKGLLETRKEEQASNVGNKRDFELKPSPIQHSISSRQQTISGSASARALESPIVIMKPARLIEKTGISDSSVFPIGGLSNSHKLQSGALHAHDKKESTSGQIAKDQSLKTSYRDASTSFSERKENSIKTTKSAQSQQRSKQFPKENGSSSVRNSGSVSPIMQQKKMESEKKSCLPSSPSDSNKSRRQSYKQTTESRSPSRKLRPKVHNPQYSDDQLSETSNELRSLSCQWDEISLQSDTITVDSKMDIEVTSSLQSAEIIDSHSPSMKAIEHLVSGSMQTKSTMRWDGYESIAELATDAPDHPSLDSVLDDSVYKYDMSSLVNRTSNAPKVDNAQESKENDNTDQWNHADGFFIINTRYREINRKKLQSIDRLIQKLRQLNSSHDETRIDYIASLCENTNPDHRYIAEILLASGLLLRAMSSELLTFQNYSSVLPINPELFLVLEQIKLSSFLSKEETSLGKVACMKLNTEKWHRKLIFDAVNEILGEKLGSFLEPWLKHNGLATKFVSAQKLLKELCFEIQKLQPLKADCCLEDEGDGLKSMLWEDVMRHSVRWTDFPSELPGVVLDVERLIFKDLVDEFLIDEVASLRVK 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02031 1051 MobiDBLite consensus disorder prediction 588 622 - -
Cca11g02031 1051 PANTHER LONGIFOLIA PROTEIN 1 1049 IPR033334 GO:0051513
Cca11g02031 1051 Coils Coil 829 849 - -
Cca11g02031 1051 MobiDBLite consensus disorder prediction 59 82 - -
Cca11g02031 1051 MobiDBLite consensus disorder prediction 83 106 - -
Cca11g02031 1051 MobiDBLite consensus disorder prediction 560 574 - -
Cca11g02031 1051 MobiDBLite consensus disorder prediction 468 505 - -
Cca11g02031 1051 MobiDBLite consensus disorder prediction 331 382 - -
Cca11g02031 1051 Pfam DUF761-associated sequence motif 301 327 IPR032795 -
Cca11g02031 1051 MobiDBLite consensus disorder prediction 631 654 - -
Cca11g02031 1051 MobiDBLite consensus disorder prediction 784 803 - -
Cca11g02031 1051 PANTHER LONGIFOLIA PROTEIN 1 1049 - -
Cca11g02031 1051 MobiDBLite consensus disorder prediction 292 311 - -
Cca11g02031 1051 MobiDBLite consensus disorder prediction 543 679 - -
Cca11g02031 1051 MobiDBLite consensus disorder prediction 487 505 - -
Cca11g02031 1051 MobiDBLite consensus disorder prediction 156 171 - -
Cca11g02031 1051 MobiDBLite consensus disorder prediction 46 107 - -
Cca11g02031 1051 MobiDBLite consensus disorder prediction 331 351 - -
Cca11g02031 1051 Pfam Domain of unknown function (DUF4378) 861 1039 IPR025486 -
Cca11g02031 1051 MobiDBLite consensus disorder prediction 156 179 - -
Cca11g02031 1051 MobiDBLite consensus disorder prediction 292 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02031 Cca-Chr11 45764215 45769089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02031 128 1051 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 43.821 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02031 - - gmx:100775311 1548.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02031 11 45764215 45769089 Cca11g02031 11 45764215 45769089 ECH
Cca11g02031 11 45764215 45769089 Cca03g00666 03 12134054 12143089 PCT