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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca11g02030
ATGAAATCAAGGAACGATGAGATAATTAGTAAGATGATGGATATTGAAAGTTCAAGTAAAGGTCATGAAGCCAGTACACAAGAAGAGGGCAATAACATTAAAACTGAGAAGTTCTTGAAGGCACCCTCCACCTCAAGGCAATGGTCAGCATTCAGAAATCCAAGAATTGTGCGAGTCTCACGTACTTTGGGAGGAAAAGATAGACACAGCAAGGTTTGCACCATTAGGGGACTGAGGGACCGAAGGATTAGACTGTCTGTACCCACAGCAGTTCAGTTATATGATCTTCAAGACAGGCTTGGACTCAACCAACCTAGCAAAGCGGTAGATTGGTTGCTTGAAGCCACCAAATCTGATATTGATAAACTACCACCACTTCAAATTCCTCATTGTTTTACTCACCAACAAACCCTACTTCCAGGTAACTCTCAGTTTTCTCTTGGACCCTTCTATGATCCTGATTCCAATTTTAGCAAGGATGGGGGAAATCAAAACCTCATGGCAAAGTCAAGGTATTGGAATATAGATTCACTAAATGGTAAGGAGTTAGGTGAAAGTGTGTCAATCTTCCAAAAAGGCAAGAGCTGGATCAAAAGAAGTGAACAAGAAAATCAAGATGGAATCTCAATTGGTGGTACTCATAATAGAGAGTATTCTTCAGCTCATAAGCTCTTCCCCATTGGGACTACAAACTCTTCTTTACTTGGTAATTTTCTAAACAATGGCATGACACATAACTCCTACCACCATTCTGAGCCTTCAAGTCTATCTTTGTCCCACTTTGGAAGCCATGGATTGTTTCCTTCTCATCCTAGCAGTGGCAGTGGTGAGCAATTTTCATCTTCTAATTTCTCAGGAGCATCTGGTCCACAGTTACTTTTTTGTCCACCTTCTGCTACACCATCTGCTTTTTACTCAGTGGAAAGTGATCCAAGACAATCCAACATCTTGAGCTCAAGTTCCCAAGTCATGATGCCTCATCCTCTCATTCATCCAACTAATTCACCTCTTAGACGCCTTCCAACATCATTTAGTTCCAAGCTCCTTGGTTCTGATAATAATGATCGGAGCCAAGATAAAGGTAGTACTCGTTCTTGA
1098
0.4126
MKSRNDEIISKMMDIESSSKGHEASTQEEGNNIKTEKFLKAPSTSRQWSAFRNPRIVRVSRTLGGKDRHSKVCTIRGLRDRRIRLSVPTAVQLYDLQDRLGLNQPSKAVDWLLEATKSDIDKLPPLQIPHCFTHQQTLLPGNSQFSLGPFYDPDSNFSKDGGNQNLMAKSRYWNIDSLNGKELGESVSIFQKGKSWIKRSEQENQDGISIGGTHNREYSSAHKLFPIGTTNSSLLGNFLNNGMTHNSYHHSEPSSLSLSHFGSHGLFPSHPSSGSGEQFSSSNFSGASGPQLLFCPPSATPSAFYSVESDPRQSNILSSSSQVMMPHPLIHPTNSPLRRLPTSFSSKLLGSDNNDRSQDKGSTRS
365
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca11g02030
365
MobiDBLite
consensus disorder prediction
321
365
-
-
Cca11g02030
365
Pfam
TCP family transcription factor
65
146
IPR017887
-
Cca11g02030
365
MobiDBLite
consensus disorder prediction
1
30
-
-
Cca11g02030
365
PANTHER
TRANSCRIPTION FACTOR TCP4-RELATED
15
360
IPR005333
GO:0003700
Cca11g02030
365
ProSiteProfiles
TCP domain profile.
65
123
IPR017887
-
Cca11g02030
365
PANTHER
TCP FAMILY TRANSCRIPTION FACTOR
15
360
-
-
Cca11g02030
365
MobiDBLite
consensus disorder prediction
336
352
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca11g02030
Cca-Chr11
45755233
45757256
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca11g02030
49
218
TCP Transcription Factor Family
AT5G60970
53.631
1.50e-50
171
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
TCP
Cca11g02030
TCP
4.7e-26
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca11g02030
-
-
pvu:PHAVU_003G183700g
473.781
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Cca11g02030
11
45755233
45757256
Cca03g00665
03
12094189
12095968
PCT
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