Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02028 ATGGGCCCACAGCCTCTCCCGCAGCAGATCCCCCTCCAAGAGACATGGTCTTTGGCAAAcaacaccaacaccaacacccagccaccaacaccaacaccaacaccaacCTTCGTGTctcctcctccctccaggatctctcctcctaccgccaccaccaccttcgccgcctctttctccAAAACCAAACACCCGTCGCCCCAGAGATGCCTCCTCCTGATCCTCCTCCTTTGCACCCTTTACTCCCGCTCCCATGCCTCCGCCAAATACTACGTCAATCTCGACTGCGACAGCACCGACACCCGCGTCTACATCTACAAGGCCCAAATCCACCACTGCCCCAACACCAACCTCCCCATCGCCATCCACTCCCTCAAAGACGGCCTCTGCCCCAACCCTGCCAGCGCCTGCGCCTACGACCGCATGGAGACTGAGCCCGACCTCGACAAGCTCCTCCACAACGTTACCGCTCTGAAAGCCGCCCTCAAGCCTCTTCTCCACTAG 501 0.4671 MGPQPLPQQIPLQETWSLANNTNTNTQPPTPTPTPTFVSPPPSRISPPTATTTFAASFSKTKHPSPQRCLLLILLLCTLYSRSHASAKYYVNLDCDSTDTRVYIYKAQIHHCPNTNLPIAIHSLKDGLCPNPASACAYDRMETEPDLDKLLHNVTALKAALKPLLH 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02028 166 MobiDBLite consensus disorder prediction 19 50 - -
Cca11g02028 166 Gene3D - 79 166 - -
Cca11g02028 166 MobiDBLite consensus disorder prediction 28 47 - -
Cca11g02028 166 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 70 165 IPR000407 GO:0016787
Cca11g02028 166 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 70 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02028 Cca-Chr11 45725127 45725627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02028 55 166 Nodulin-like Gene Family AT4G19180 39.259 2.66e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02028 - - gmx:100809597 120.553