Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02008 ATGTCTTCTTCGGTTATCGCCGTTGCTACCATTCTGGTAGCGATTCTCATTTACCGCCTTTTCAAGCTCATATCTGGGCCTTCATTACCACTGCCACCTGGGCCTCGCCCATGGCCCATCGTCGGAAACTTGCCCCACATGGGCCCTGTGCCGCACCACGCCCTCGCAGCGTTGGCCCGCACCCATGGGCCTCTCATGCACCTTCGCTTGGGCTTCGTCGACGTTGTGGTGGCGGCTTCCGCCGCCGTGGCGGAGCAGTTCCTGAAGGTTCACGACGCCAATTTCTCCAGCCGGCCACCCAACTCCGGCGCCAAATACATAGCTTATAACTATCACGACCTTGTCTTTGCCCCCTACGGCCCACGGTGGCGGTTGCTCCGGAAAATTAGCTCCGTTCACTTGTTCTCCGGCAAGGCCTTGGACGACTTTAGACACGTGCGACAGGAAGAGGCAGCAAGATTGACACGCAACTTAGCAAGTTCAAACTCAAAAGCAGTGAACCTTGGACAATTTTTAAATCTATGCACCACTAATGCATTGGCGAGGGTAATGATAGGTAGACGAGTGTTCAATGAAGGCAAAGATGGTTGTGATCCTAAAGCAAATGAATTTAAGTCCATGGTGTTAGAGCTTATGGAATTGTCTGGTGTTTTCAATATTGGCGATTTTGTTCCTGCCTTGGAGTGGTTGGATCTTCAAGGAGTGCAAACCAAGATGAAGAAATTGCATAAGAGGTTTGATGCATTTTTAACCAACATTGTTGAGGAACACAAGATGTACAAGAGTGAGAAACATCAAGACATGTTGAGTGCCTTATTGTCACTTAAAGAGTCTTCCGAGGATGGAGAAAAACTCACATATACAGAGATCAAAGCGTTACTTCTGAACATGTTTGCTGCTGGGACGGACACATCATCGAGCACAACGGAGTGGGCCATGGCTGAATTGATCAGGAGCCCAAGAATTTTGGCCCAGGTCCAACAAGAGTTGGATACTGTTGTGGGACGAGATAGGCTTGTGACTGAACTGGACTTGCCTCACCTTCCTTATCTGGAGGCTGTGGTAAAGGAAACGTTTCGTCTTCACCCATCAACCCCTCTCTCCCTCCCACGTGTTGCAGCAGAGAGTTGTGAGGTCTTTGATTACCACATTCCAAAAGGTGCAACTCTTTTGGTACATGTTTGGGCCATAGCTCGTGACCCAAAGGAATGGCCCAATCCACTGGAGTTCAAGCCCGAAAGGTTCCTCTCTGGTAGTGAAAAGGTTGGTGTTGATGTTAAAGGGAATGACTTTGAGGTTATACCTTTCGGTGCTGGACGTAGAATGTGTGCTGGTATGAACTTGGGTATTAGAGTGGTCCAACTCCTCACTGCTACCCTGGCCCATGCATTTGATTGGGAGTTGGAAAATGGGCTTAATCCAGAAAAACTCAACATGGATGAAGCATATGGGCTCACCCTCCAAAGAGCATTGCCCTTATCAGTCCACCCTCATCCTAGGCTCTCACCACACGTGTACTCGTCATAA 1527 0.4918 MSSSVIAVATILVAILIYRLFKLISGPSLPLPPGPRPWPIVGNLPHMGPVPHHALAALARTHGPLMHLRLGFVDVVVAASAAVAEQFLKVHDANFSSRPPNSGAKYIAYNYHDLVFAPYGPRWRLLRKISSVHLFSGKALDDFRHVRQEEAARLTRNLASSNSKAVNLGQFLNLCTTNALARVMIGRRVFNEGKDGCDPKANEFKSMVLELMELSGVFNIGDFVPALEWLDLQGVQTKMKKLHKRFDAFLTNIVEEHKMYKSEKHQDMLSALLSLKESSEDGEKLTYTEIKALLLNMFAAGTDTSSSTTEWAMAELIRSPRILAQVQQELDTVVGRDRLVTELDLPHLPYLEAVVKETFRLHPSTPLSLPRVAAESCEVFDYHIPKGATLLVHVWAIARDPKEWPNPLEFKPERFLSGSEKVGVDVKGNDFEVIPFGAGRRMCAGMNLGIRVVQLLTATLAHAFDWELENGLNPEKLNMDEAYGLTLQRALPLSVHPHPRLSPHVYSS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02008 508 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02008 508 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02008 508 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02008 508 Pfam Cytochrome P450 32 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02008 508 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02008 508 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02008 508 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02008 508 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02008 508 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02008 508 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02008 508 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02008 508 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02008 508 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02008 508 PANTHER FLAVONOID 3'-MONOOXYGENASE 4 498 - -
Cca11g02008 508 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 498 - -
Cca11g02008 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Cca11g02008 508 Gene3D Cytochrome P450 27 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02008 508 SUPERFAMILY Cytochrome P450 32 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02008 Cca-Chr11 45546580 45552140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02008 10 507 Cytochrome P450 AT5G07990 66.996 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02008 K05280 - gmx:547475 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02008 11 45546580 45552140 Cca11g02008 11 45546580 45552140 ECH