Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01947 ATGCTCCAAGCCAAGGCCGAAGCCCCCTCTTCCTCCACGCTGGACTTGTCGGAGACTAGTCCAGACGATACATCCCTAGGCAGCAGAAAACGAAGACCCTCGGAGCAACATGACTTGTCCTCAACGCACCAAATGGGGAGTTATCTCCTGCAGTCCAGTGCAGGCGCCGTTCCATCCACCCACGCCGCCAATATTTGGATGGTGGCCAATTCCAACAACAGCGCGCAAGTCATGAGCGGCGATCCCATATGGACGTTCCCACCGGTTAACAACACCGCCTTGTACCGCGGCACCGTTTCCAGCGGCTTGCATTTCATGAACTTCCCCACTCCCATGGCGCTCTTGCCCAGTCAGCAACTAGGGTCTTCCGCGATTGGTGCTCTCGGAGGAGGTAGTAATAGTAATAATATGAATGAAGGGCATTTGAGTATGCTTGCGGGGCTTAGCCCTTATCGTCCTGTTATTGGCGTTTCCGAGTCTCAGGCCAGTGCCTCGCAATCGCACCGTGGAGGCGCCGCCGATGATCGCCATGATAATACCACCACCCACCACTCCTAG 558 0.5591 MLQAKAEAPSSSTLDLSETSPDDTSLGSRKRRPSEQHDLSSTHQMGSYLLQSSAGAVPSTHAANIWMVANSNNSAQVMSGDPIWTFPPVNNTALYRGTVSSGLHFMNFPTPMALLPSQQLGSSAIGALGGGSNSNNMNEGHLSMLAGLSPYRPVIGVSESQASASQSHRGGAADDRHDNTTTHHS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01947 185 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 2 184 - -
Cca11g01947 185 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 184 IPR005333 GO:0003700
Cca11g01947 185 MobiDBLite consensus disorder prediction 170 185 - -
Cca11g01947 185 MobiDBLite consensus disorder prediction 1 43 - -
Cca11g01947 185 MobiDBLite consensus disorder prediction 24 38 - -
Cca11g01947 185 MobiDBLite consensus disorder prediction 1 23 - -
Cca11g01947 185 MobiDBLite consensus disorder prediction 159 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01947 Cca-Chr11 44863448 44864005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01947 81 178 TCP Transcription Factor Family AT3G47620 37.879 1.02e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01947 - - pvu:PHAVU_003G190900g 271.166