Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01929 ATGTTCAAGCTTTTGGTTAGTAGAGCATCTAAGATTTCAATTTCACGCAACCACAATGCTTTTGCTTCTTTCACTTTCTCTAGCAGGTGTGTTCATTCATTACCATTTGCAACTGTAGAAGCAGAAGAGATATCTGGTTCTAGGCCTGCTGAAGTTTTGAACCTGGTGCAAGGAAAATGGGTAGGATCTTCAAACTTGAATACAGTTGTGGATCCTTTGAATGGAGACTCATTTATTAAAGTTGCTGAAGTCGCTGAAACAGACATTCAGCCCTTTGTGAAAAGCTTGTCTAGCTGTCCAAAACATGGTGTACACAATCCTTTCAAGGCACCTGAGAGATATCTCATGTTTGGAGAGATATCTGCTAAGGCAGCTCACATGCTATCACTTCCTAAGGTTTCAGATTTCTTTACAAGGTTAATACAAAGAGTTTCTCCAAAGAGTTACCAGCAGGCTTTTGCGGAAGTCTATGTGACACAAAAGTTTCTAGAGAACTTTTGTGGAGATCAGGTTCGTTTCTTGGCAAGGTCCTTTGGTGTTCCTGGAAATCACCTTGGACAACAAAGTCATGGTTTTCGTTGGCCATATGGTCCCGTGGCAATTATTACTCCTTTTAATTTTCCCTTAGAGATTCCTGTCCTTCAATTGATGGGAGCGCTTTATATGGGCAACAAGCCGGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTTATGGAACAAATGTTGCGCCTGCTTCATACTTGTGGCTTACCTGTAGAAGATGTAGACTTCATAAATTCTGATGGGAAGACAATGAACAAGCTGTTACTAGAGGCAAATCCACGAATGACCCTGTTTACTGGTAGTTCAAGAGTGGCAGAGAAGTTGGCAGTGGATTTGAAGGGCCGTGTTAAATTGGAAGATGCTGGATTTGACTGGAAAATATTGGGCCCTGATGTCAATCAGGAAGATTACGTAGCGTGGGTATGTGATCAGGATGCATATGCATGCAGTGGCCAGAAGTGCTCGGCACAATCATTGTTATTCATGCATGAGAACTGGTCTAAAACTTCCTTGCTATCTAAGTTGAAAGATCTTGCTGAGAGAAGAAAGCTAGCAGACTTGACTATCGGCCCAGTTCTCACAGTGACAACTGATTCAATGCTAGAACACATCAATAAATTGCTTGAGATACCAGGATCAAAGCTGCTCTTCGGGGGTCAACCTTTAGAAGATCATTCAATTCCGTCTATTTATGGCGCTATTAAACCAACAGCTGTCTATGTTCCTCTTGAGGAAATTATGAAGAATAAGAATTTTGAGCTTGTGACAAAGGAAATATTTGGACCCTTCCAGGTTATTACCGAATACAAAAGCAGTCAATTATCAGTTGTATTGGATGCTGTGGAAAGAATGCATAACCATTTGACAGCTGCTGTAGTTTCAAATGATCCTTTGTTTTTACAGGAAGTCATTGGCCAATCAGTAAATGGCACTACTTATGCTGGTTTAAGAGCAAGGACAACTGGAGCTCCACAGAATCACTGGTTTGGACCCGCTGGTGATGCTAGAGGTGCAGGAATTGGAACACCCGAAGCTATAAAACTTGTATGGTCTTGTCATAGAGAAATTATCTATGATGTTGGGCCTGTGCCAAAGAATTGGGAAATTCCTCCATCAACATGA 1665 0.4144 MFKLLVSRASKISISRNHNAFASFTFSSRCVHSLPFATVEAEEISGSRPAEVLNLVQGKWVGSSNLNTVVDPLNGDSFIKVAEVAETDIQPFVKSLSSCPKHGVHNPFKAPERYLMFGEISAKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAFAEVYVTQKFLENFCGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPVEDVDFINSDGKTMNKLLLEANPRMTLFTGSSRVAEKLAVDLKGRVKLEDAGFDWKILGPDVNQEDYVAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKLKDLAERRKLADLTIGPVLTVTTDSMLEHINKLLEIPGSKLLFGGQPLEDHSIPSIYGAIKPTAVYVPLEEIMKNKNFELVTKEIFGPFQVITEYKSSQLSVVLDAVERMHNHLTAAVVSNDPLFLQEVIGQSVNGTTYAGLRARTTGAPQNHWFGPAGDARGAGIGTPEAIKLVWSCHREIIYDVGPVPKNWEIPPST 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01929 554 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 22 553 - -
Cca11g01929 554 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 46 306 IPR016162 GO:0016491
Cca11g01929 554 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 328 339 IPR016160 GO:0016491
Cca11g01929 554 Pfam Aldehyde dehydrogenase family 66 497 IPR015590 GO:0016491
Cca11g01929 554 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 307 495 IPR016163 GO:0016620
Cca11g01929 554 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 22 553 IPR044638 GO:0004029
Cca11g01929 554 SUPERFAMILY ALDH-like 54 501 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01929 Cca-Chr11 44630484 44637406 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01929 1 554 Aldehyde Dehydrogenase Gene Family AT5G62530 78.815 0.0 945
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01929 K00294 - gmx:100806579 1039.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01929 11 44630484 44637406 Cca11g01929 11 44630484 44637406 ECH