Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01928 ATGAGGGATGCAATAGTTGTGAAAATTTTGGAGCTTAGGCTTTGGTTTTTGAGAGTGCTTTTGGTTGCTGTATCTGCAAGGAATGATAGTGGTTCCATGATGGTGGTACAAGGAGGAGGCTGGCTTGATGAAACCATTCCAAGTCCATTACGGAAACCAATGCTATCTCCACGTGATGTTAAGACCAGAGCAACTAAGGATTCAATTTCACGCAGCCACAATGCCTTTGCAACTTTTGCTTTCTCTAGGTTTGCTCATTCATTATCCTTTGCCACTATTGAAGCAGAAGAGATATCAGGCTCTAAGCCTGCTGAAGTTTTGAACTTGGTGCAAGGTAAATGGTTAGGATCTTCAAACTGTAATACAGTTGTAGATCCTTTAAATGGAGACTCGTTCATTAAAGTTTCTGAAATTGATGAAACAGGCATTCAGCCTTTTGTGGAAAGCTTGTCCAGCTGTCCCAAACATGGTGTGCACAATCCTTTTAAGGCACCAGAGAGATATCTCATGTTGGGAGACGTATCTACTAAAGCAGCTCACATGCTATCACTTCCTAAGGTTTCGGATTTCTTTACAAGGTTAATACAAAGAGTTTCTCCAAAGAGTTACCAGCAGGCTTTTGCGGAAGTCTATGTGACACAAAAGTTTCTAGAGAACTTTTGTGGAGATCAGGTTCGTTTCCTGGCAAGGTCTTTTGGTGTACCTGGAAATCATCTTGGACAACAAAGTCATGGTTTCCGTTGGCCATATGGTCCCGTAGCAATTATTACTCCTTTTAATTTTCCCTTAGAGATTCCAGTCCTTCAATTGATGGGTGCACTATATATGGGCAACAAGCCAGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTTATGGAACAAATGTTGCGCCTGCTTCATGCATGTGGCTTACCTGTGGAAGATGTGGACTTCATAAATTCTGATGGGAAGACAATGAACAAGCTCTTGATGGAGGCAAATCCACGAATGACCCTTTTTACTGGTAGTTCAAGAGTGGCAGAGAAGTTGGCCCTTGATTTGAAGGGCCGTGTTAAATTGGAAGATGCTGGATTTGACTGGAAGATACTGGGCCCTGATGAAGATTACATAGCGTGGGTCTGTGATCAGGATGCATATGCATGCAGTGGTCAGAAATGCTCGGCACAATCATTGTTATTTATGCATGAGAACTGGTCTAAAACTTCTTTGCTATCTAAGTTGAAAGATCTTGCTCAGAGAAGAAAGCTAGAAGACTTGACAATCGGCCCAGTCCTAACAGTTACGACTGATACAATGCTTGAACACACGAATAAATTGCTTGAGATACCAGGATCAAAGCTGCTCTTTGGGGGTAGTCCTTTAGAGAACCATTCAATTCCGTCTATTTATGGTGCTATTAAACCAACAGCTGTTTATGTCCCTCTTGAGGAAATTATGAAGGATAGGAATTTTGAGCTTGTGACAAAAGAAATATTTGGACCCTTTCAGGTTATTACTGACTACAAGAACAGTCAACTATCAGTTGTGTTGGATGCTGTGGAAAGGATGCATAACCATTTAACAGCTGCTGTAGTTTCCAGTGATCCTTTATTTTTACAGGAAGTGATTGGCAACACAGTAAATGGTACAACTTATGCTGGTCTAAGAGCAAGGACAACCGGTGCTCCTCAGAATCATTGGTTTGGACCTGCTGGAGACGCTAGAGGTGCAGGAATTGGAACACCGGAGGCTATAAAACTTGTTTGGTCTTGTCACAGAGAAATAATATATGATGTTGGGCCAGTGCCAAAGGATTGGAAAATTCCTCCATCCACTTGA 1818 0.4186 MRDAIVVKILELRLWFLRVLLVAVSARNDSGSMMVVQGGGWLDETIPSPLRKPMLSPRDVKTRATKDSISRSHNAFATFAFSRFAHSLSFATIEAEEISGSKPAEVLNLVQGKWLGSSNCNTVVDPLNGDSFIKVSEIDETGIQPFVESLSSCPKHGVHNPFKAPERYLMLGDVSTKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAFAEVYVTQKFLENFCGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHACGLPVEDVDFINSDGKTMNKLLMEANPRMTLFTGSSRVAEKLALDLKGRVKLEDAGFDWKILGPDEDYIAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKLKDLAQRRKLEDLTIGPVLTVTTDTMLEHTNKLLEIPGSKLLFGGSPLENHSIPSIYGAIKPTAVYVPLEEIMKDRNFELVTKEIFGPFQVITDYKNSQLSVVLDAVERMHNHLTAAVVSSDPLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPAGDARGAGIGTPEAIKLVWSCHREIIYDVGPVPKDWKIPPST 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01928 605 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 73 604 IPR044638 GO:0004029
Cca11g01928 605 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 379 390 IPR016160 GO:0016491
Cca11g01928 605 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 104 359 IPR016162 GO:0016491
Cca11g01928 605 PANTHER ALDEHYDE/HISTIDINOL DEHYDROGENASE-RELATED 73 604 - -
Cca11g01928 605 Pfam Aldehyde dehydrogenase family 121 547 IPR015590 GO:0016491
Cca11g01928 605 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 366 548 IPR016163 GO:0016620
Cca11g01928 605 SUPERFAMILY ALDH-like 108 552 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01928 Cca-Chr11 44620679 44630102 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01928 66 605 Aldehyde Dehydrogenase Gene Family AT5G62530 78.676 0.0 934
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01928 K00294 - gmx:100813821 1021.92