Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01917 ATGAAAATGGGAAATGTACCATGGATTTCCTTGGTGGTTTTGATGACAGTACTCATCCCTTCCTCTCTTGCACTCCCCCAGGATGGTCTAACGTTGTTGGAAATCAAAAGCACTTTGAATGATACTAAGAATGTTCTGAGCAACTGGCAAGAGTTTGATGAGTCTCCTTGTGCATGGACTGGTATTTCTTGTTATCCTGGTGAACAAAGAGTTCGCTCAATAAATCTGCCATTCATGCAACTTGGAGGGATTATTTCTCCCAGCATTGGTAAACTCAGTAGACTACAGAGATTGGCACTTCATCAGAACAGCTTGCACGGAACCATTCCTAATGAACTCACCAATTGTTCTGAGCTAAGGGCGCTGTACTTGAGGGGTAATTATTTCCAAGGAGGCATACCATCAAATATTGGAAATCTTTCATACTTGAATATATTGGATTTGTCAAGCAACTCATTAAAAGGTGCTATACCTTCCTCTATTGGCCGTCTCTCACATTTGCAAATTCTGAACTTGTCTACCAATTTCTTTTCCGGAGAAATTCCTGATATTGGAGTATTAAGCACCTTTGACAAGAATGCGTTTATTGGCAATTTAGATCTTTGTGGGCGGCAAGTCCAAAAGCCATGTAGAACATCCTTTGGTTTCCCTGTGGTGCTGCCACATGCTGAAAGTGATGAAGCTGCTGTCCCTGCCAAAAGGTCTACTTCACATTACATGAAGTGGGTGCTAATTGGTGCAATGGCAACTACGGGTCTTGCACTTGTCATGATTCTTTCATTTCTCTGGACCCGTATGTTATCAAAGAAGGAACGAGCCGCGAAGAGATACACAGAAGTCAAGAAACAAGTTGATCCAGAAGCAAGCACAAAACTTATTACCTTTCATGGTGATCTGCCATACACATCATCTGAGATCATAGAGAAGCTGGAGTCTCTTGATGAAGAGGATATAGTAGGATCAGGAGGATTTGGTACTGTTTACCGAATGTTGATGAATGATTGTGGTACATTTGCTGTTAAACGTATTGATCGAAGTTTCGAGGGCTCTGATCAAGTGTTTGAAAGGGAACTAGAGATCTTGGGAAGCATCCAGCACATAAATTTAGTAAATCTGCGTGGTTACTGCAGGCTTCCTTCGTCCAGGCTCCTTATCTTTGATCATTTGGCCTTAGGCAGCTTAGATGATCTCTTGCATGAAAATACTGAACAACGGCGACGACTGAATTGGACTGATCGCCTAAAGATAGCTCTTGGTTCTGCCCGGGGTTTGGCATACTTGCACCATGAATGCATTCCAAAaattattcatcgtaacataaagtccagcaacatcctccttgatgaaaacatggagccacatatttctgattttggtcttGGAAAGCTTTTGGTTGATGAAGAGGCACATGTTACCACAGTGGTTGCTGGTACATTTGGTTATTTGGCACCAGAGTATCTACAAAGTGGGAGAGCAACTGAGAAGTCAGATGTATATAGCTTTGGAGTTCTGTTACTGGAACTTGTAACCGGAAAGAGGCCTACGGATCCTTCCTTTGTGAAAAGAGGTTTAAATGTTGTTGGTTGGATGAACACATTAGTGAGAGAAAACAGATTGGAAGATGTGGTAGACAAAAGATGCAATGATGCAGATGCAGGAACTCTTGAAGTGATTCTTGAGCTGGCAGCAAGATGCACCGATGGAAATGCAGATGATCGTCCATCAATGAACCAGGTGTTACAGTTGTTGGAACAAGAGGTCATGTCTCCTTGCCCAAGCGAGTTTTATGAGTCTCATTCAGACCACTAA 1809 0.4069 MKMGNVPWISLVVLMTVLIPSSLALPQDGLTLLEIKSTLNDTKNVLSNWQEFDESPCAWTGISCYPGEQRVRSINLPFMQLGGIISPSIGKLSRLQRLALHQNSLHGTIPNELTNCSELRALYLRGNYFQGGIPSNIGNLSYLNILDLSSNSLKGAIPSSIGRLSHLQILNLSTNFFSGEIPDIGVLSTFDKNAFIGNLDLCGRQVQKPCRTSFGFPVVLPHAESDEAAVPAKRSTSHYMKWVLIGAMATTGLALVMILSFLWTRMLSKKERAAKRYTEVKKQVDPEASTKLITFHGDLPYTSSEIIEKLESLDEEDIVGSGGFGTVYRMLMNDCGTFAVKRIDRSFEGSDQVFERELEILGSIQHINLVNLRGYCRLPSSRLLIFDHLALGSLDDLLHENTEQRRRLNWTDRLKIALGSARGLAYLHHECIPKIIHRNIKSSNILLDENMEPHISDFGLGKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFVKRGLNVVGWMNTLVRENRLEDVVDKRCNDADAGTLEVILELAARCTDGNADDRPSMNQVLQLLEQEVMSPCPSEFYESHSDH 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01917 602 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
Cca11g01917 602 SUPERFAMILY L domain-like 25 199 - -
Cca11g01917 602 Gene3D Ribonuclease Inhibitor 26 212 IPR032675 -
Cca11g01917 602 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Cca11g01917 602 Gene3D Phosphorylase Kinase; domain 1 273 388 - -
Cca11g01917 602 Pfam Protein kinase domain 315 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01917 602 ProSiteProfiles Protein kinase domain profile. 313 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01917 602 PANTHER LRR RECEPTOR-LIKE KINASE 2 602 - -
Cca11g01917 602 Gene3D Transferase(Phosphotransferase) domain 1 389 593 - -
Cca11g01917 602 PANTHER RECEPTOR-LIKE PROTEIN 55 2 602 - -
Cca11g01917 602 SUPERFAMILY Protein kinase-like (PK-like) 295 584 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01917 Cca-Chr11 44508917 44513608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01917 8 592 Receptor kinase-like Gene Family AT2G35620 48.376 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Cca11g01917 Pkinase 4.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01917 - - gmx:100803920 1106.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01917 11 44508917 44513608 Cca11g01917 11 44508917 44513608 ECH