Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01911 ATGGGGAATTGCAACGGCTGCATGAGAGAGTCAAGCGAAAGGCAAAGGAGAAAGCAGAGAGGCAAAGCAAACCCTTACGCGGAGGAGGAGCTTGGCTATGGCGTTCCCATCCGCGTCCTCAAGGACGTAACCTCTCGGACCCTCATCGCCGACAAGTACGTCATAGGTCGGGAGCTGGGTCGGGGGGAGTTCGGGATAACCTACCTCTGCACCCACCGAGAGACCAAGCAGGACCTCGCCTGCAAGTCCATCTCCAAGCGCAAGCTCCGCACCGCCGTCGACGTCGAGGACGTGCGCCGCGAGGTCGCCATCATGTCCACCCTGCCGGACCACCCCAACGTCGTCAGGCTCAAGGCCACTTACGAGGACCAGGAGAACGTCCACCTTGTCATGGAGCTTTGCGCCGGAGGGGAGCTCTTTGACCGGATCGTCGCACGTGGCCACTACAGCGAGCGTGCGGCCGCGCACGTCGCTAGGACCGTTGCCGAGGTTGTTAGGATGTGTCATGCGAATGGCGTCATGCATCGGGACCTTAAGCCTGAGAATTTTCTGTTTGCTAGTAAGAAGGAGAATTCCGCTCTCAAGGCTATTGATTTTGGCCTCTCCGTCTTTTTCAAGCCCGGGGAGAGGTTTTCCGAGATTGTGGGGAGTCCTTACTATATGGCGCCGGAGGTTTTGAAGAGGAACTATGGCCCGGAGGTCGATGTGTGGAGTGCTGGTGTCATTCTTTATATTTTGCTTTCTGGGGTTCCTCCGTTTTGGGCAGAGGATGAAAGAGGGGTGGCTTTGGCCATTTTGAGGGGTGTGATCGACTTCAAGAGGGAGCCTTGGCCTCAGATTTCGGATACTGCTAAGAGCCTTGTGCGCCAGATGTTGGAGCCTGATCCCAAAAAGCGCTTGACGGCTGAACAGGTGCTTGAACATTCCTGGTTACAAAATGCAAAGAAAGCTTCTAATGTTCCATTAGGAGATATCGTGAGGACAAGGCTTAAGCAGTTCTCTGTCATGAATAGATTCAAAAAGAGAGCACTTCGGGTAATTGCAGAGCATTTATCTGTTGAAGAGGTGGAAATAATCAAGGACATGTTTGCATTGATGGATACTGACAAAGATGGCAAAGTATCGTATGAGGAACTGAAGGCTGGGTTACGGAAGGTTGGTTCACAATTGGCTGAGCCAGAGATAAAGATGCTGATGGAAGTGGCTGATGTTGATGGGAATGGAGTACTTGACTATGGAGAGTTTGTAGCCGTGACAATTCACTTACAAAGAATGGAGAATGATGAGCATTTCCACAAAGCATTCATGTATTTTGACAAAGACGGGAGTGGGTATATTGAGTTAAACGAGCTAGAGATAGCATTAGTAGATGAGTCGGGAGAAACTGATACAGCTGTATTGAATGACATCATGCGTGAAGTTGACACTGACAAGGATGGTCGCATCAGTTATGAAGAGTTTGTGGCCATGATGAAAACGGGAACTGACTGGAGAAAAGCATCTAGGCAGTATTCAAGGGAGAGATTCAAGAGCTTGAGCATAAATTTAATGAAGGACGGTTCACTTCAGCTTCATGATGGTATTAGTGGCCAAGCTATCATGGTTTGA 1608 0.5019 MGNCNGCMRESSERQRRKQRGKANPYAEEELGYGVPIRVLKDVTSRTLIADKYVIGRELGRGEFGITYLCTHRETKQDLACKSISKRKLRTAVDVEDVRREVAIMSTLPDHPNVVRLKATYEDQENVHLVMELCAGGELFDRIVARGHYSERAAAHVARTVAEVVRMCHANGVMHRDLKPENFLFASKKENSALKAIDFGLSVFFKPGERFSEIVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLSGVPPFWAEDERGVALAILRGVIDFKREPWPQISDTAKSLVRQMLEPDPKKRLTAEQVLEHSWLQNAKKASNVPLGDIVRTRLKQFSVMNRFKKRALRVIAEHLSVEEVEIIKDMFALMDTDKDGKVSYEELKAGLRKVGSQLAEPEIKMLMEVADVDGNGVLDYGEFVAVTIHLQRMENDEHFHKAFMYFDKDGSGYIELNELEIALVDESGETDTAVLNDIMREVDTDKDGRISYEEFVAMMKTGTDWRKASRQYSRERFKSLSINLMKDGSLQLHDGISGQAIMV 535
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01911 535 PANTHER BNAA09G44420D PROTEIN 16 511 - -
Cca11g01911 535 ProSiteProfiles EF-hand calcium-binding domain profile. 462 497 IPR002048 GO:0005509
Cca11g01911 535 SMART serkin_6 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01911 535 ProSitePatterns EF-hand calcium-binding domain. 439 451 IPR018247 -
Cca11g01911 535 ProSitePatterns Protein kinases ATP-binding region signature. 59 82 IPR017441 GO:0005524
Cca11g01911 535 SUPERFAMILY Protein kinase-like (PK-like) 40 338 IPR011009 -
Cca11g01911 535 MobiDBLite consensus disorder prediction 1 25 - -
Cca11g01911 535 SMART efh_1 430 458 IPR002048 GO:0005509
Cca11g01911 535 SMART efh_1 466 494 IPR002048 GO:0005509
Cca11g01911 535 SMART efh_1 358 386 IPR002048 GO:0005509
Cca11g01911 535 SMART efh_1 394 422 IPR002048 GO:0005509
Cca11g01911 535 CDD EFh 430 492 IPR002048 GO:0005509
Cca11g01911 535 ProSitePatterns EF-hand calcium-binding domain. 403 415 IPR018247 -
Cca11g01911 535 SUPERFAMILY EF-hand 339 518 IPR011992 -
Cca11g01911 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Cca11g01911 535 ProSiteProfiles Protein kinase domain profile. 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01911 535 Gene3D Transferase(Phosphotransferase) domain 1 139 319 - -
Cca11g01911 535 Gene3D - 320 495 - -
Cca11g01911 535 MobiDBLite consensus disorder prediction 10 25 - -
Cca11g01911 535 ProSitePatterns EF-hand calcium-binding domain. 367 379 IPR018247 -
Cca11g01911 535 Pfam EF-hand domain pair 429 492 IPR002048 GO:0005509
Cca11g01911 535 Pfam EF-hand domain pair 359 418 IPR002048 GO:0005509
Cca11g01911 535 CDD STKc_CAMK 52 310 - -
Cca11g01911 535 ProSiteProfiles EF-hand calcium-binding domain profile. 354 389 IPR002048 GO:0005509
Cca11g01911 535 ProSiteProfiles EF-hand calcium-binding domain profile. 390 425 IPR002048 GO:0005509
Cca11g01911 535 ProSiteProfiles EF-hand calcium-binding domain profile. 426 461 IPR002048 GO:0005509
Cca11g01911 535 Gene3D Phosphorylase Kinase; domain 1 54 138 - -
Cca11g01911 535 Pfam Protein kinase domain 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01911 535 ProSitePatterns EF-hand calcium-binding domain. 475 487 IPR018247 -
Cca11g01911 535 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 511 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca11g01911 Cca-Chr11 44397439 44400787 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01911 1 535 EF-hand Containing Proteins AT1G74740 77.122 0.0 877
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Cca11g01911 Pkinase 4.6e-75 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01911 K13412 - gmx:100800559 972.23
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01911 11 44397439 44400787 Cca11g01911 11 44397439 44400787 ECH