Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01896 ATGGTGTCGACTTTGGAAAAGAAGAAGAACCTAAGCAACCTCATCATCCCCGCTTCCTCTTcatcccccaacccatccccatccccatccccatcgcaatccatcacaAGCCCACACGTCATCCACAGTAGGACCCACTCCTTCGTGGGCCCATCCCCTCGCTACAACCCATCATCCACCACCCCTCTCTTCTTCCTCCacgaggccgacgacgacgacgaagaACAAGAACAACCACCACTGGGCCCGGGCCCTAAGATTGGGCCTTCCGATTTCCATATTCTCCGCGTGGTGGGCCAGGGCTCCTTCGGCAAGGTCTTTCTCGTCACAAAAAAAGGCGATGGAGTCTTCGCCATGAAGGTCATGAGGAAGGACACCATCATCAAGAAAAACCACGTCGATTACATGCGAGCCGAGAGGGATATTCTCACCAAAGTCCTTCACCCTTTCATCGTTCAGCTCCGTTACTCTTTCCAGACCAAATCTAAATTGTATTTGGTCTTGGACTTCATCAACGGAGGCCATCTCTTCTTTCACTTGTATCGCCATGGTATCTTCCGTGAGGATCAGGCAAGGCTTTACACTGCTGAGATAGTGTCTGCTGTTTCGCATCTTCACAGCAACGGCATCGTGCATCGCGATCTTAAGCCTGAAAACATTCTTATGGATGCGGATGGCCATGTCATGCTAACTGATTTTGGAATGTCAAAAGAGATTGATGAATTGGGAAGATCCAACTCTCTGTGTGGGACTGTGGAATACATGGCTCCTGAAATCCTTCTGGGTAAAGGCCATAACAAGGATGCTGATTGGTGGAGTGTTGGTATTCTGTTGTATGAAATGCTAACAGGGAAGGCACCATTTACACACACTAACAGAAAGAAACTTCAGGAGAAAATTATTAAAGAGAAAGTTAAACTTCCACCATTCCTTACCAGTGAAGCTCACTCTTTGCTCAAAGGATTGCTGCAAAAGGATCCATCCGCAAGGTTAGGAAGTGGGCCAAATGGAGATAACCAGATCAAAAGTCATAAATGGTTTAGGTCAATCAATTGGAAAAAATTGGAGGCAAGAGAACTGGAACCAAAGTTCAAACCAGATGTATCTGGGAAAGACTGTACAGCTAATTTTGACCAATGTTGGACAGCAATGCCTGCTGATGACTCACCAGCACCCACACCTACAGCAGGTGACCATTTCCAGGGCTATACTTACGTGGCACCCAACCCTTGGCTTTCATCTGGCACACTAGACTGA 1257 0.4431 MVSTLEKKKNLSNLIIPASSSSPNPSPSPSPSQSITSPHVIHSRTHSFVGPSPRYNPSSTTPLFFLHEADDDDEEQEQPPLGPGPKIGPSDFHILRVVGQGSFGKVFLVTKKGDGVFAMKVMRKDTIIKKNHVDYMRAERDILTKVLHPFIVQLRYSFQTKSKLYLVLDFINGGHLFFHLYRHGIFREDQARLYTAEIVSAVSHLHSNGIVHRDLKPENILMDADGHVMLTDFGMSKEIDELGRSNSLCGTVEYMAPEILLGKGHNKDADWWSVGILLYEMLTGKAPFTHTNRKKLQEKIIKEKVKLPPFLTSEAHSLLKGLLQKDPSARLGSGPNGDNQIKSHKWFRSINWKKLEARELEPKFKPDVSGKDCTANFDQCWTAMPADDSPAPTPTAGDHFQGYTYVAPNPWLSSGTLD 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01896 418 ProSiteProfiles Protein kinase domain profile. 92 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01896 418 Gene3D Transferase(Phosphotransferase) domain 1 171 366 - -
Cca11g01896 418 SMART pkinase_C_6 348 407 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cca11g01896 418 SUPERFAMILY Protein kinase-like (PK-like) 90 409 IPR011009 -
Cca11g01896 418 ProSitePatterns Protein kinases ATP-binding region signature. 98 130 IPR017441 GO:0005524
Cca11g01896 418 MobiDBLite consensus disorder prediction 1 63 - -
Cca11g01896 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Cca11g01896 418 Pfam Protein kinase C terminal domain 368 405 IPR017892 GO:0004674|GO:0005524|GO:0006468
Cca11g01896 418 Pfam Protein kinase domain 92 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01896 418 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 23 414 - -
Cca11g01896 418 ProSiteProfiles AGC-kinase C-terminal domain profile. 348 415 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cca11g01896 418 SMART serkin_6 92 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01896 418 MobiDBLite consensus disorder prediction 33 63 - -
Cca11g01896 418 MobiDBLite consensus disorder prediction 1 21 - -
Cca11g01896 418 PANTHER RIBOSOMAL PROTEIN S6 KINASE 23 414 - -
Cca11g01896 418 Gene3D Phosphorylase Kinase; domain 1 90 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01896 Cca-Chr11 44204181 44207628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01896 23 408 AGC Kinase Gene Family AT3G08720 59.223 2.56e-177 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Cca11g01896 Pkinase 2.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01896 K04688 - gmx:100798259 692.189