Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01857 ATGGCATCTCGCAGACTTTCCTGGCTACTCTCTCGCCATTCTTCTGGAGCTGCTTCTCTGCTTCACTCTCAGGGAAGAAACTCTGGAGGGTGGAGAAACATTAACAGGTTTAGGTTTAGCACCGCTGCAGCAATTGAGGACCTAATCACTCCACAAGTTCCAATACGTTATACACAGCACCTGATAAATGGCCAATTTGTGGATGCAGCATCAGGGAAAACATTTCCAACTTATGACCCTCGCACAGGAGAAGTGATTGCTCATGTTGCTGAAGGGGATGTTGAAGATATCAACCGTGCAGTATCAGCTGCGCGCAAGGCCTTTGATGAAGGACCTTGGCCAAAAATGACTGCATATGAAAGAAGTCGGATATTGCTTCGCTTTGCTGATTTGGTAGAGAAACACAGCGATGAGCTTGCTGCTCTGGAGACATGGGACAATGGAAAGACTCATGAACAGGCTGCAAAGGTTGAATTACCGATGTTTGTGCGTTTATTTCACTATTATGCTGGTTGGGCAGATAAAATTCATGGGCTGACAGTCCCAGCTGATGGAAATTATCATCTTCAGACATTGCATGAACCAATTGGTGTAGCGGGACAAATTATACCTTGGAACTTTCCTCTTCTTATGTTTGCTTGGAAAGTTGGACCAGCTCTAGCATGTGGAAATACCATTGTCCTGAAGACTGCTGAGCAAACACCGCTAACAGCTCTCTTTGTGGCAAAACTATTTCATGAGGCTGGCCTTCCCGAAGGTGTTCTGAATGTAGTTTCTGGGTATGGTCCAACTGCTGGTGCAGCTCTTGCAAGTCATATGGACGTGGACAAGCTAGCATTCACTGGCTCAACAGATACTGGAAAAGTTGTACTTGAATTGGCTGCAAGAAGCAATCTCAAGCCAGTGACATTGGAGCTTGGAGGGAAATCACCTTTCATAATATGTGAGGATGCTGATGTTGACAGGGCTGTTGAACTTGCACACTTTGCTCTCTTCTTTAATCAGGGGCAATGTTGCTGTGCCGGGTCTCGTACCTTTGTACATGAGCGTGTCTATGATGAGTTCTTGGAGAAATCAAAGCAACGGGCTTTGAGACGTGTTGTTGGTGATCCATTCAAGAAAGGCGTTGAACAAGGTCCTCAGATTGACGTGGAACAATTTGAGAAAGTCATTAGGTACATACGGTCTGGAATTGAAAGCAATGCCACCCTTGAATGTGGGGGTGACAGATTGGGCTCAAAAGGCTTCTTTGTCCAGCCAACTGTCTTCTCAAATGTTAAGGATGACATGTTGATTGCAAAAGACGAAATCTTTGGCCCAGTTCAGTCCATCTTGAAATTCAAGGACATTGATGAAGTAATACGACGGGCAAATGCAACACGTTATGGTCTTGCAGCAGGTGTGTTTACCAAGAACGTGAGCACGGCCAACACATTGATGCGAGCACTGAGAGCTGGAACTGTGTGGATCAATTGCTTTGATGTTTTTGATGCTGCAATTCCTTTTGGTGGCTACAAGATGAGTGGTATTGGCAGAGAGAAAGGAATCTACAGTCTTCACAACTACCTGCAGGTGAAAGCTGTTGTCTCACCACTGCACAATCCTGCGTGGCTATGA 1617 0.4552 MASRRLSWLLSRHSSGAASLLHSQGRNSGGWRNINRFRFSTAAAIEDLITPQVPIRYTQHLINGQFVDAASGKTFPTYDPRTGEVIAHVAEGDVEDINRAVSAARKAFDEGPWPKMTAYERSRILLRFADLVEKHSDELAALETWDNGKTHEQAAKVELPMFVRLFHYYAGWADKIHGLTVPADGNYHLQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTALFVAKLFHEAGLPEGVLNVVSGYGPTAGAALASHMDVDKLAFTGSTDTGKVVLELAARSNLKPVTLELGGKSPFIICEDADVDRAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFLEKSKQRALRRVVGDPFKKGVEQGPQIDVEQFEKVIRYIRSGIESNATLECGGDRLGSKGFFVQPTVFSNVKDDMLIAKDEIFGPVQSILKFKDIDEVIRRANATRYGLAAGVFTKNVSTANTLMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVSPLHNPAWL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01857 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 308 497 IPR016163 GO:0016620
Cca11g01857 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 62 526 IPR016162 GO:0016491
Cca11g01857 538 SUPERFAMILY ALDH-like 52 532 IPR016161 GO:0016491
Cca11g01857 538 CDD ALDH_F2BC 55 529 - -
Cca11g01857 538 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 28 538 - -
Cca11g01857 538 Pfam Aldehyde dehydrogenase family 66 528 IPR015590 GO:0016491
Cca11g01857 538 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 332 343 IPR016160 GO:0016491
Cca11g01857 538 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 28 538 - -
Cca11g01857 538 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 304 311 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01857 Cca-Chr11 43698957 43703763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01857 1 538 Aldehyde Dehydrogenase Gene Family AT3G48000 79.777 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01857 K00128 - gmx:100811501 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00487 03 7941862 7965069 Cca11g01857 11 43698957 43703763 ECH
Cca11g01857 11 43698957 43703763 Cca11g01857 11 43698957 43703763 ECH