Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01848 ATGAAGAACTTATACTGGTTTAAAGAAAATTCTAACAACGTGCGATCTGGGAGAAGGCTTTCACTTGGGGAATACAAGCGAGCAGTGTCATGGCATAGTAGGATTTACAGAGGCATATACAAGCACATGGATGTTGCAATTAAGCTGGACCACATTCAGTTCCTTACAAAACTTGTTCTGAAATTGGCCCTAGACGTTGCACGTGGCATGCAATATCTTCATTCTCAGGGTATTATACTTCACAGGGACCCCAAATCAGAAAATCCGCCATTGCGGGAACTCCTAACAGGATTGACACCATTTGACTACATGACAGCAGAGCCGGCTCCTGGCTGCATATGCTGTGACTCACAAGTTTTGCCTGACATCCAGATGATTCTTCAGCTTTTTACAACATTCAAGATTCGAATGCAAGGCCTCCGTTACCATGTAACTGTCCAAGGGCATTTAGTAATCTCATCAACAACAGATGCTGGTCAAGCAATCCACAGAAACGGCCACATTTTGATGAGATAG 516 0.436 MKNLYWFKENSNNVRSGRRLSLGEYKRAVSWHSRIYRGIYKHMDVAIKLDHIQFLTKLVLKLALDVARGMQYLHSQGIILHRDPKSENPPLRELLTGLTPFDYMTAEPAPGCICCDSQVLPDIQMILQLFTTFKIRMQGLRYHVTVQGHLVISSTTDAGQAIHRNGHILMR 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01848 171 Gene3D Transferase(Phosphotransferase) domain 1 49 93 - -
Cca11g01848 171 SUPERFAMILY Protein kinase-like (PK-like) 50 132 IPR011009 -
Cca11g01848 171 PANTHER SERINE-THREONINE PROTEIN KINASE 1 31 - -
Cca11g01848 171 PANTHER SERINE-THREONINE PROTEIN KINASE 56 91 - -
Cca11g01848 171 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 1 31 - -
Cca11g01848 171 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 56 91 - -
Cca11g01848 171 ProSiteProfiles Protein kinase domain profile. 1 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01848 Cca-Chr11 43570482 43577385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01848 59 88 MAP Kinase Kinase Kinase AT1G62400 73.333 2.08e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01848 - - gmx:100778530 84.3445