Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01831 ATGCAGAGCACCGTtctctctctctccccttccctctctctcctcCGCAAACCCCACACCCGTGTCTCTGCTTCTTCCGCTTCCAAACTCAATGTTATTCTCACTCCCTCTTCCTCTTCCTCTTCCTTTCCATGCCAACCATGctctctcgcttcatcttctatctctttcaaactccctccctctcgctccctcCATGCCAGAGGCAGAGCAGCCTCCGTGCCGGAGAGAAGCTCCGCCGACTCCTCCGCCGCCAACATCCTGGAACTAGGGGTCCTGTTTGTCTTCTGGTTCCTCTTCAACATATACTTCAACATCTACAACAAACAGGTTTTGAAGGTTTACCACTTCCCTTTAACCGTAAGCACTATTCAGTTCGCTGTGGGGGCTCTCCTCGTGGCCTTCATGTGGGGTTTTAATCTCTACAAGAGACCTAAAGTCAGTGGCGCCCAGCTTGCAGCGATATTGCCTCTGGCTGTCGTCCATACTTTAGGGAACCTTTTCACCAACATGAGTCTTGGAAAGGTGGCTGTGTCTTTCACTCACACCATAAAAGCCATGGAGCCTTTCTTTTCTGTCATCCTTTCTGCTATGTTCCTTGGAGAGaatcctactgcatgggtggttggttcccttgtgcctattgttggtggggtggcgctcgcgtctgctacggaggcttctttcaattgggctggattttggagtgctatggcttccaatttgacaaatcaatcTCGTAATGTTCTCAGCAAAAAACTCATGGTTAACAAGGAGGAATCTATGGACAACATAACGCTCTTCTCAATAATAACAGTTATGTCCTTCTTGTTATCAGCACCAGTAACCCTTCTCATGGAGGGTGTCAAATTTACGCCTACTTACCTGCAATCCGCTGGATTAAACGTTAACGAAGTGTTCATCAGATCTCTACTTGCTGCACTATGTTTCCATGCATATCAGCAAGTTTCTTATATGATACTGCAGAAGGTGTCACCTGTTACCCACTCTGTGGGAAATTGTGTGAAGAGGGTTGTGGTCATCGTGAGCTCTGTCATCTTCTTCCAAACACCTGTATCGCCAATCAACGCAATTGGGACTGCTATAGCTCTTGCCGGTGTTTTCCTGTATTCAAGGGTGAAGCGACTTAAGCCAAAGACAATTTAG 1167 0.383 MQSTVLSLSPSLSLLRKPHTRVSASSASKLNVILTPSSSSSSFPCQPCSLASSSISFKLPPSRSLHARGRAASVPERSSADSSAANILELGVLFVFWFLFNIYFNIYNKQVLKVYHFPLTVSTIQFAVGALLVAFMWGFNLYKRPKVSGAQLAAILPLAVVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGENPTAWVVGSLVPIVGGVALASATEASFNWAGFWSAMASNLTNQSRNVLSKKLMVNKEESMDNITLFSIITVMSFLLSAPVTLLMEGVKFTPTYLQSAGLNVNEVFIRSLLAALCFHAYQQVSYMILQKVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINAIGTAIALAGVFLYSRVKRLKPKTI 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01831 388 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 88 386 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cca11g01831 388 PANTHER PLASTID PHOSPHATE TRANSLOCATOR 21 384 - -
Cca11g01831 388 PANTHER SOLUTE CARRIER FAMILY 35 21 384 - -
Cca11g01831 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 303 382 - -
Cca11g01831 388 Pfam Triose-phosphate Transporter family 89 378 IPR004853 -
Cca11g01831 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 133 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01831 Cca-Chr11 43329067 43333269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01831 1 386 Antiporters AT5G33320 67.813 3.32e-179 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01831 K15283 - gmx:100780925 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00462 03 7275475 7277102 Cca11g01831 11 43329067 43333269 ECH
Cca11g01831 11 43329067 43333269 Cca11g01831 11 43329067 43333269 ECH
Cca11g01831 11 43329067 43333269 Cca03g00462 03 7275475 7277102 PCT