Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01799 ATGGAAGATGTGAATCGCATCCCAAGAGAAGCAAAAGATTACTATTCTAGTTCAATATGGTTGTCAGAAAATGCACAGGTATTTGAGGATCTCAAGAAAAGTGACCTTAATAGAGTTAATGGCATCTATGTTACTGCTGGCAAAGATTCCTACGGCTATGACTACCAGGAAATAGAGACTCCTGAAATTTCCAGAACATTGACTTCAGAAATTGTGGACTATGATCTCTATTCTAGACAAACATTGACTTCAGAAATTGTGGAAATAATTGAGGATGGCAGCAAGAGCATAAACAACAAAGATAGAAGAGTTGATGATCTTTATGTGGCTGTTGGCAAAGATGACGTGGATGTTGTCAAATGGGCTCTTGATCATGCTGTTTCTCCTGGTTCCCGGATTTTTCTTATCCATGTCTCTTCTCCAATCACATTGATTCCTACGCCAGTTGGAAAATTTGAAAGAAGCCAACTTACCCCGCAGCAAGTGAGACTATACGTGAATGAAGTGAACAACAAGAGGAAGGATCTTTTGCAGAAGTACATTCAGATGAGCAACGAAGCCAAGGTAGTAGCAGAAACCTTGCTTCTTGAGAGCAATGACACAGGAAAAGCAATTCTGGACCTCACCACTATTCTTAACATAACCAACCTTGTCATGGGAATCAAAAAGCTACCCTGCACACGGCGCAATAACAAACTAAGCAAAGGAGTGCTTGTAAAGAAGAATGCACCAAAATCCTGCAAGGTTACCTTGGTTTATAACGGCGAGGTGTTTGTGTCTAAACCTTACATGGATGGCTTGGAATCCTGTGGCTTAGAATCACAGAGTAAAAGCCACTCCAAAGCTAACATCTTTCAGTGCATGTGCTTTTCAGGGTGCGTGAGAGAAGACAATGGTACCTAG 903 0.412 MEDVNRIPREAKDYYSSSIWLSENAQVFEDLKKSDLNRVNGIYVTAGKDSYGYDYQEIETPEISRTLTSEIVDYDLYSRQTLTSEIVEIIEDGSKSINNKDRRVDDLYVAVGKDDVDVVKWALDHAVSPGSRIFLIHVSSPITLIPTPVGKFERSQLTPQQVRLYVNEVNNKRKDLLQKYIQMSNEAKVVAETLLLESNDTGKAILDLTTILNITNLVMGIKKLPCTRRNNKLSKGVLVKKNAPKSCKVTLVYNGEVFVSKPYMDGLESCGLESQSKSHSKANIFQCMCFSGCVREDNGT 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01799 300 Gene3D HUPs 103 229 IPR014729 -
Cca11g01799 300 CDD STK_N 108 255 - -
Cca11g01799 300 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 116 225 - -
Cca11g01799 300 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 67 296 - -
Cca11g01799 300 Coils Coil 166 186 - -
Cca11g01799 300 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 67 296 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01799 81 261 U-box Gene Family AT3G61390 28.877 2.63e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01799 - - gmx:100816919 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01799 11 42851365 42854833 Cca11g01799 11 42851365 42854833 ECH