Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01783 ATGATCGCTGCCATACGCGAGGCGTGTGCGAGTGGAAGCTCATGCGTGCATCTGAGTGAGTTGTTGATTGCACTCACCAACAACACATTGTCTAGGTGCGTTTTTGGACAAAAGTATGACTCACCCGATGGTAGTAGAAGCTTCGGAGTGATTCGGAGGAAGTTGTTGAGTCAGTTCACGGCTTTCTGTGTCGGAGATTTCTTCCCCTCGTTGAGTTGGGTTGATGTTCTAACGGGCCGAATTCGGAAGTTAAAGGCCACTCTTAGTTCGTTAGATGTTTTCTTTGATCAGGTGATTGCAGAACATAAAACAAAGATGAAGAAGAAAGGTGAAGATGATGGTCAACCTGATAAGAAAGACTTCGTGGATAAAGatgAGGCTCGAATGCTCGGCTTTGACCTCTCCCAAGATAACCTCAAAGCATTGCTAGTGGACATGTTTATAGGGGCAAGTGACACAACTTCAACCACTTTGGAATGGGCTATGATGGCAGAGCTCATGAAGAATCCAAATACCATGGAAAAGGTCCAAGAAGAGGTAAGAAGAGTGGTCGAGAACAAAGCAGAAGTGGATGAAAACGATGTGAAACAAATGAATTACTCGAATCTTCAGGGAAAGTCTCAAATTGTTCAGGAAGAGTTAGTGAAGTTTGGTGAACAAATGGTTAGTAGTTCAGAAGGTACAAGAGCTCTAGCCTTGCAGTTATGCCGTGAATTTGAGGACAAATTTTTGCAACATCTTACTGGAGGCGAGGGTAATGGTTGGAAAGTTGTTGCCAGTTTTGAAGGGAATTTTCCTAACAGAATCAAGCAACTTCCTATTGACAGACACTTTGACATAAACAATGTTAAGAGGATTGTCCTAGAAGCAGACGGATATCAACCTTATCTTATCTCTCCAGAGAAAGGTTTAAGATCCTTGATTAAAGGTGTTCTTGAACTGGCAAAGGAGCCATCACGAATGTGTGTTGATGAGGTACATCGCGTGCTTGTGGATCTTGTTTCTGCTTCTGCAAATGCAACGCCTGGTCTTGGAAGGTATCCTCCATTCAAGAGAGAGATTGTGGCAATTGCAAGTTCAGCCCTGGAGGAATTTAAAAATGAATCCAAAAAAATGGTGGTTGCACTAGTTGATATGGAACGTGCATTTGTTCCACCCCAACACTTTATTCGTTTAGTGCAGAGGCGGATGAATTTGAAACTCATTAGAATCACCACCATTGATTTGGTATGTGACTTCTAG 1242 0.4267 MIAAIREACASGSSCVHLSELLIALTNNTLSRCVFGQKYDSPDGSRSFGVIRRKLLSQFTAFCVGDFFPSLSWVDVLTGRIRKLKATLSSLDVFFDQVIAEHKTKMKKKGEDDGQPDKKDFVDKDEARMLGFDLSQDNLKALLVDMFIGASDTTSTTLEWAMMAELMKNPNTMEKVQEEVRRVVENKAEVDENDVKQMNYSNLQGKSQIVQEELVKFGEQMVSSSEGTRALALQLCREFEDKFLQHLTGGEGNGWKVVASFEGNFPNRIKQLPIDRHFDINNVKRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRMCVDEVHRVLVDLVSASANATPGLGRYPPFKREIVAIASSALEEFKNESKKMVVALVDMERAFVPPQHFIRLVQRRMNLKLIRITTIDLVCDF 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01783 413 PRINTS E-class P450 group I signature 138 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01783 413 PRINTS E-class P450 group I signature 25 43 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01783 413 Gene3D Dynamin, middle domain 223 409 - -
Cca11g01783 413 Pfam Dynamin central region 202 388 IPR000375 -
Cca11g01783 413 PANTHER DYNAMIN 201 402 IPR022812 -
Cca11g01783 413 PANTHER DYNAMIN-2A 201 402 - -
Cca11g01783 413 Coils Coil 173 193 - -
Cca11g01783 413 Pfam Cytochrome P450 2 201 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01783 413 Gene3D Cytochrome P450 1 203 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01783 413 SUPERFAMILY Cytochrome P450 5 202 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01783 Cca-Chr11 42667042 42676819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01783 11 200 Cytochrome P450 AT3G48310 35.897 3.05e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01783 K01528 - gmx:100809385 382.489