Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01781 ATGGCTCTTGAATCAACATATTCAGCCATCAACTTATCAGTGCTTTGCGTCTTTCTGAGCGTGGCATTGGGGTTGGTGGTGTTTAAGATCAGAAGAAGAAGCAAATCCAACGCACCTCCATCCCCACCCAAGCTACCCTTCATCGGAAACCTTCACCAGCTAGGCACGCTGCCACACCGTTCCTTGCAAGCCCTCTCTCGCAACTATGGCCCACTCATGATGCTTCAAATGGGCCAGATCCCAACGCTGATCGTTTCATCTGCACACGTGGCCGCAGAAATTTTCAAAAACCACGACGTCGTTTTCTCCTACCGCCCCAAGACAACCGCTACTGGAGTCTTTTTCTACGGCTACAAGGACATTGGTTTCTCCCCCTACGGCGAGGAGTGGAGACAGAAAAGGAAGGTCTGCGTTCTCGAGCTCGTCAGCATGAAAAGCGTGCGGTCGTTTCAGTTCATCCGCGTTGAAGAAGTCGCGGAAATGATCGCTGCCATACGCGAGGCTTGTGCCAGTGGAAGCTCATGCGTGCATCTGAGTGAGTTGTTGATTGCACTCACCAACAACACATTGTCTAGGTGCGTTTTTGGACAAAGGTATGACTCACCCGATGGTAGTAGAAGCTTCGGAGTGCTTGGGAGGAAGTTGGTGATTGCAGAACATAAAACAAAGATGAAGAAGAAAGGTGCAGATGATTGTCAATCTGATAAGAAAGACTTCGTGGATATTCTCCTTCAACTTGAGGAGGCTCGAATGCTCGGCTTTGACCTCTCCCAAGATAACCTCAAAGCATTGCTAGTGGACTTTTTTGTGGGAGGTACTGACTCGGTCGCATCGGCAGTAGAATGGGTTATTTTAGAGCTTGTAAGAAATCCGATGACAATGAAGAAGGTACAAGAAGAAGTGAGAACAGTTGTAGGTCATAATAAATCAAATGTGGAAGAAAATGATGTTAATCAAATGCACTTTCTAAAATGTGTAGTCAAAGAAACTTTAAGGTTACATCCGCCTGTTCCTCTTTTGGCTCCTAGAGGAACAAGGTCTAGTGTGAAACTAAATGGATATGATATTCCAGCAAAAACAAATGTAATTATCAATGCATGGGCAATTCAAAGAGATCCTAAAATTTGGAAAAGTCCAGAAGAGTTCATGCCAGAGAGATTTGAAAAGAGTCAAGTTGATTTTAAAGGTCAAGAATCCTTTCAGTTAATTCCATTTGGTTTTGGGAGAAGAGGATGTCCTGGAATGAATTTTGCACTTGCTGCTGCTGAGTATGTGCTTGCTAGCCTTCTTTATTGGTTTGATTGGACGTTGCCTGAAGATTCTAATACACTAAATATAGATATGACCGAGATATTCGCATTTGTTGTCTCAACGAAAGTGCCACTGCACGTTAAACCAAAATCCTTTACATTTTAA 1416 0.4407 MALESTYSAINLSVLCVFLSVALGLVVFKIRRRSKSNAPPSPPKLPFIGNLHQLGTLPHRSLQALSRNYGPLMMLQMGQIPTLIVSSAHVAAEIFKNHDVVFSYRPKTTATGVFFYGYKDIGFSPYGEEWRQKRKVCVLELVSMKSVRSFQFIRVEEVAEMIAAIREACASGSSCVHLSELLIALTNNTLSRCVFGQRYDSPDGSRSFGVLGRKLVIAEHKTKMKKKGADDCQSDKKDFVDILLQLEEARMLGFDLSQDNLKALLVDFFVGGTDSVASAVEWVILELVRNPMTMKKVQEEVRTVVGHNKSNVEENDVNQMHFLKCVVKETLRLHPPVPLLAPRGTRSSVKLNGYDIPAKTNVIINAWAIQRDPKIWKSPEEFMPERFEKSQVDFKGQESFQLIPFGFGRRGCPGMNFALAAAEYVLASLLYWFDWTLPEDSNTLNIDMTEIFAFVVSTKVPLHVKPKSFTF 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01781 471 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01781 471 PRINTS P450 superfamily signature 325 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01781 471 PRINTS P450 superfamily signature 271 288 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01781 471 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01781 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
Cca11g01781 471 SUPERFAMILY Cytochrome P450 39 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01781 471 Gene3D Cytochrome P450 25 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01781 471 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01781 471 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01781 471 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01781 471 PRINTS E-class P450 group I signature 260 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01781 471 PRINTS E-class P450 group I signature 324 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01781 471 PRINTS E-class P450 group I signature 280 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01781 471 PRINTS E-class P450 group I signature 365 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01781 471 Pfam Cytochrome P450 39 202 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01781 471 Pfam Cytochrome P450 217 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01781 471 PANTHER CYTOCHROME P450 71B11-RELATED 12 218 - -
Cca11g01781 471 PANTHER CYTOCHROME P450 71B11-RELATED 216 469 - -
Cca11g01781 471 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 12 218 - -
Cca11g01781 471 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 216 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01781 Cca-Chr11 42598528 42665578 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01781 29 470 Cytochrome P450 AT3G48310 42.283 2.49e-125 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01781 - K20617 gmx:100781909 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01781 11 42598528 42665578 Cca03g00403 03 6219953 6221734 PCT