Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01780 ATGGGTCTCAAACAATGGAGTTACGAGCAAATGAAAGGAGCGTTCTCTTCTACCTTATATCTATCTCTTTCCTTCTTTATCAGCGTTCTGATATTGTTTAAGCTGATAAGAAGAACCAAATCCAAAACCAAACTGAATCTGCCTCCGTCTCCACCAAAACTACCCATCATAGGCAATCTTCATCAGTTTGGTGCACTCCCACATCGCTCCCTCAGAGATCTCTCTCTCAAGTATGGTGATATGATGATGATGCAGTTGGGGAGGCAGACTCCATCTCTCGTGGTTTCATCCGCAGATGTGGTCAGGGAAATTACGAAAACTCATGACATAGCTTTTTCGGACCGAGCCCACACCACTGCTGCGAAACTCTGTCTGTATGATTGCACAGACATTGGGTTTGCACTCTATGGAGAAAACTGGAGAGAGAAAAAAAAAGTATGCGTTCAACGCTTTTTAAGCACCAAAGTGGTGGAATCCTTTCGTCTCATCAGAGTAGAAGAAGTTGCGGAGTTGGTGAATCAGCTACGTGAAGCAAGCTCAGCTGATGTGCGCTCCGTGAATCTAAGGGAGTTGCTTTTGTCAACCCCCATGAAAATCGTGTACAAGTGTATTTTCGGACGGAACTATTCGGAACATAATTACAACAAGGTGAAGGACTCGATAAGGAAAGTCTTAGTTCATCTTGCGGCTTTCACTGTGAGGGATCACTTTCCTTTGTTGGGTTGGATTGATGTTCTCACGGGAAAGATTCGAGCATGCAAGACCACTTTTGAAGAGTTGGATGCTGCATTGGATGAAGCCATAGCAGAGCAAATCACAGCCAAGACCAACTCCAAAGAAAAAGACTTTGTGGATATCCTCCTCCAACTTCAAGAGGATAATACGTTGAACATTGAGTTCACCAAAAATGATATCAAAGGAATTATAACGGACTTTCTTTTGGGAGGTACTGATGCGGTCGCATCGGCAATAGAATGGGTTATTTTAGAGCTTGTAAGAAATCCGATGACAATGAAAAAGGTACAAGAAGAAGTGAGAAGAGTTGTAGGCCATAAATCAAATGTGGAAGAAAATGATATTAATGAAATGCACTTTCTAAAATGTGTAGTCAAAGAAACTTTAAGGTTACATCCACCTGTTCCTCTTTTGGCTCCTAGAGGAACAAGGTCTAGTGTGAAACTAAATGGATATGATATTCCAGCAAAAACAAATGTAATTATCAATGCATGGGCAATTCAAAGAGATCCTAAATTTTGGAAAAGTCCAGAAGAGTTCATGCCAGAGAGATTTGAAAAGAGTCAAGTTGATTTTAAAGGTCAAGAATCCTTTCAGTTAATTCCATTTGGTTTTGGGAGAAGAGGATGTCCTGGAATGAATTTTGCACTTGCTGCTACTGAGTATGTGCTTGCTAGCCTTCTTTATTGGTTTGATTGGACGTTGCCTGCAGATTCTAATGCACTAAATATAGATATGACTGAGATATTCGCATTTGTTGTCTCAACGAAAGTGCCACTGAACGTTAAACCAAAATCCTTTACATTTTAA 1545 0.4071 MGLKQWSYEQMKGAFSSTLYLSLSFFISVLILFKLIRRTKSKTKLNLPPSPPKLPIIGNLHQFGALPHRSLRDLSLKYGDMMMMQLGRQTPSLVVSSADVVREITKTHDIAFSDRAHTTAAKLCLYDCTDIGFALYGENWREKKKVCVQRFLSTKVVESFRLIRVEEVAELVNQLREASSADVRSVNLRELLLSTPMKIVYKCIFGRNYSEHNYNKVKDSIRKVLVHLAAFTVRDHFPLLGWIDVLTGKIRACKTTFEELDAALDEAIAEQITAKTNSKEKDFVDILLQLQEDNTLNIEFTKNDIKGIITDFLLGGTDAVASAIEWVILELVRNPMTMKKVQEEVRRVVGHKSNVEENDINEMHFLKCVVKETLRLHPPVPLLAPRGTRSSVKLNGYDIPAKTNVIINAWAIQRDPKFWKSPEEFMPERFEKSQVDFKGQESFQLIPFGFGRRGCPGMNFALAATEYVLASLLYWFDWTLPADSNALNIDMTEIFAFVVSTKVPLNVKPKSFTF 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01780 514 PANTHER CYTOCHROME P450 71B11-RELATED 13 512 - -
Cca11g01780 514 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01780 514 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01780 514 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01780 514 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01780 514 SUPERFAMILY Cytochrome P450 48 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01780 514 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 13 512 - -
Cca11g01780 514 Gene3D Cytochrome P450 37 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01780 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Cca11g01780 514 Pfam Cytochrome P450 48 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01780 514 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01780 514 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01780 514 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01780 514 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01780 514 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01780 514 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01780 514 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01780 514 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01780 Cca-Chr11 42594037 42597655 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01780 43 511 Cytochrome P450 AT2G30770 41.684 1.05e-126 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01780 K20617 - gmx:100803922 686.026