Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01770 ATGCCTCAGACTGTGTTGTTTTTGTCACTGTGGTTAAGCCTCCTAATTGTATTATTTTATGTATTTGCAGTCATGCATGATTTGCGCATGATTCATACTGACCTGAAGCCTGAAAACATACTACTAGTTTCGCCAGAGTATGTGAAAGTTCCAGACTACAAGAGTTCATCTAGATCACCAAGTTCCTATTTCAAGAGGGTTCCCAAATCAAGTGCTATAAAGGTTATTGATTTTGGAAGCACCACTTATGAGCGAGAAGATCAGAATTACATTGTATCAACTCGTCATTATAGGGCTCCTGAAGTTATCCTTGGACTTGGCTGGAGCTTTCCGTGTGATATATGGAGCGTGGGATGTATACTGGTTGAGTTATGCTCGGGAGAAGCTTTGTTTCAGACTCATGAAAATTTAGAGCATCTTGCAATGATGGAAAGGGTACTTGGTCCATTACCGCAGCACATGTTGAAGAGAGTTGACCGACATGCTGAGAAGTATGTTAGAAGGGGTAGATTAGACTGGCCTGAGGGTGCAACAACAAGGGACAGTATTAAAGCTGTGATGAAGCTTCCTAGGCTACAGAACCTTATAATGCAACATGTTGATCATTCAGCTGGCGATCTCATACATCTCTTGCAGGGGTTACTTAGATATGACCCATCTGAAAGACTTACAGCCAAGGAAGCTCTTAGACATTCCTTCTTTATGAGAGATCACTTTAGGAGATAA 726 0.4146 MPQTVLFLSLWLSLLIVLFYVFAVMHDLRMIHTDLKPENILLVSPEYVKVPDYKSSSRSPSSYFKRVPKSSAIKVIDFGSTTYEREDQNYIVSTRHYRAPEVILGLGWSFPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGATTRDSIKAVMKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPSERLTAKEALRHSFFMRDHFRR 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01770 241 Pfam Protein kinase domain 23 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01770 241 SMART serkin_6 1 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01770 241 ProSiteProfiles Protein kinase domain profile. 1 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01770 241 PANTHER KINASE AFC1 18 241 - -
Cca11g01770 241 SUPERFAMILY Protein kinase-like (PK-like) 20 238 IPR011009 -
Cca11g01770 241 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 18 241 - -
Cca11g01770 241 Gene3D Transferase(Phosphotransferase) domain 1 14 234 - -
Cca11g01770 241 ProSitePatterns Serine/Threonine protein kinases active-site signature. 30 42 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01770 Cca-Chr11 42380902 42385209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01770 18 238 MAP Kinase Gene Family AT3G59790 26.316 7.79e-18 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Cca11g01770 Pkinase 1.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01770 K08287 - gmx:100804452 429.483