Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01768 ATGATCTCTTTCGCAGTCTTCGTTTTCCTCACACTCTTGTTCACCTTGTCACTGATAAAACACATGAGAAAGGGAGGTGCAGAGAAGAAAGTACCCCCAGGGCCAACGAAACTACCCTTCATCGGCAACCTCCACAACCTTGGAAAGTTGCCACATCGATCCCTTCAACGCCTTTCACGCCACCACGGACCCCTCATGTTCTTGCAGTTAGGTTCAATACCCACCTTGGTAGTCTCCTCTGCCGAGATGGCTAAAGAGATTTTCAAAAACCATGACCCCGTTTTCTCCGGCAGGCCTCAGTTACGCGCTGCCAACCGCTTGGGATACGGTTCAGCCGTGAGTTTCTCTCCTTACGGCGAGTACTGGAGAGAGATGAGGAGGATCATGATCTCGGAGCTGTTGAGTCCGAGGAGGGTTCAATCGTTTGAAGCTGTGAGATTGGAAGAGGTGAAGCTTCTGCTTCGCTCCATAGCTCTTTCTTCTCATCCTGTGGACTTGAGTGAGTTCACCCTTTCGCTCACTAACAACGTTGTTTGCCGGATTGCTCTCGGGAAAAGGGACAGGTTCGGAGTAGAAAATAACACGCTTAGTGAGATGCTTAAGGAAACGCAGGAGATGTTGGGAGGGTTCTTTCTGGTTGACTTTTTCCCTCGGTTGCGGTGGCTCGGCAAGTTCTGTGCCATTGAAAATAGGCTTGAGAGAAATTTCAGAGAAATGGATAAGTTTTATGAGCAGGTCATTAAGgagcatgttgataaacatgagagggatgaagctgagcatgagcatgaagatgTTGTCGATGTACTTCTTCGAGTTCAGAGGGATCCAAATCAACCAATCGCCATCACTGATGACCAAATCAAGGGTGTACTAGTGGACATCTTTGTAGCGGGAACCGACACTGCTGCGGCGACAATGATATGGACAATGAGTGAGTTGATTAGGAACCCAAATGCAATGAAAAGAGCACAAGAAGAAATAAGACAAGTTTTGAAGGGAAAAGAGATGGTAGAAGAGGTTGACCTCCCGAGACTCTTGTACTTCAAATCAGTTGTGAAGGAGGCACTAAGACTCCATCCACCAGCGCCATTACTCGTGCCAAGAGAGACCACAGAGGCTTGCACGATCCAAGGGTTCGAAATCCCAGCCAAAACGAGGGTCCTTGTGAATGCAAAGTCAATAGCAATGGACCCCACTTGTTGGGAGAATCCAAATGAGTTCTTGCCAGAGAGGTTCTTGGATAGTCCAATTGACTTCAGAGGACAACACTTTGAGATGTTGCCATTTGGGGTTGGCCGAAGAGGCTGTCCCGGAATGAACTTTGCTATGCCACTTGTTGAGTTGGTTCTTGCAAATCTTCTCTATCGTTTTCACTGGGAGCTGCCTCTTGGGCTTGGAATTCAAGACTTGAATATGGAAGAAGCGATTGGCATAACTATGCATAAGAGAGATCATCTTTGGCTCAAAGCCACCCCTTTCCTCCAGTAG 1491 0.4608 MISFAVFVFLTLLFTLSLIKHMRKGGAEKKVPPGPTKLPFIGNLHNLGKLPHRSLQRLSRHHGPLMFLQLGSIPTLVVSSAEMAKEIFKNHDPVFSGRPQLRAANRLGYGSAVSFSPYGEYWREMRRIMISELLSPRRVQSFEAVRLEEVKLLLRSIALSSHPVDLSEFTLSLTNNVVCRIALGKRDRFGVENNTLSEMLKETQEMLGGFFLVDFFPRLRWLGKFCAIENRLERNFREMDKFYEQVIKEHVDKHERDEAEHEHEDVVDVLLRVQRDPNQPIAITDDQIKGVLVDIFVAGTDTAAATMIWTMSELIRNPNAMKRAQEEIRQVLKGKEMVEEVDLPRLLYFKSVVKEALRLHPPAPLLVPRETTEACTIQGFEIPAKTRVLVNAKSIAMDPTCWENPNEFLPERFLDSPIDFRGQHFEMLPFGVGRRGCPGMNFAMPLVELVLANLLYRFHWELPLGLGIQDLNMEEAIGITMHKRDHLWLKATPFLQ 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01768 496 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01768 496 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01768 496 PRINTS E-class P450 group I signature 173 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01768 496 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01768 496 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01768 496 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01768 496 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01768 496 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01768 496 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01768 496 SUPERFAMILY Cytochrome P450 32 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01768 496 Pfam Cytochrome P450 32 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01768 496 Gene3D Cytochrome P450 22 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01768 496 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01768 496 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01768 496 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01768 496 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01768 496 Coils Coil 321 341 - -
Cca11g01768 496 PANTHER OS08G0105600 PROTEIN 1 494 - -
Cca11g01768 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Cca11g01768 496 PANTHER CYTOCHROME P450 71A9 1 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01768 Cca-Chr11 42349157 42351926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01768 9 496 Cytochrome P450 AT3G26300 42.600 4.12e-138 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01768 K20617 - gmx:100806157 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01768 11 42349157 42351926 Cca11g01768 11 42349157 42351926 ECH
Cca03g00402 03 6215216 6217400 Cca11g01768 11 42349157 42351926 PCT