Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01722 ATGGCCACCACCACCAGCCTTGGCGGCGCCGCCGCCGGTGGAGACGACCGCGTCCTCGCCACGGCTCAGCAGATCGTCAAGAGTCTGAGAGCCGCCAAAGAGGATCGCGAAGACATGCTTCTCATCTTCTCCACCTTCGACAACCGCCTCTCCGGCATCTCCGACCTCATCAACGGCGACGATTCCAAATCCTCCGACGAGGAAGACCTCGGAAACTTCGAAGCCGCCGAGAAAGTCATCCTCGCCGACGCCTCCCTCTCCGGCGAGCCTTCCCGCCAATCCACGTCGCTCTTCAACCCTCCCAACAACCCCGCCGAGTACTTATCCGCCGTCGACGAGATCATCCACTGGATGGAGCACCTCTCCGTCGCGCCTCCCTCCTCCTCCGCCGCTCGTACCGGCCAGATCATCGTCGACCGCGCCGAGAACGCGATTCAGCTCGCCATGTTGCGCCTCGAGGACGAGCTCCGCCACGTCCTCATTTGCAACACCATCCCTCTCGACGCCGTCAGCCGCTACGGCTCCATAAGGAGGCGCGGCGTCAGCCTCGGCGACGATTTGTTCGTCGATTTGGTGCGTCCCGAAGCGGTGCAAGACCTAAGAGAAATCATCGATCGCATGTTTAGGTCTGGTTACGAGAGAGAGTGTCTTCAGGTTTATAGTAGTGTCCGTCGTGACGCTTTGGATGAGTGTTTGGTTATTCTCGGTGTTGAGAGGTTGAGTATTGAGGAGGTTCAGAAGGTTGAGTGGAGGAGTTTGGATGAGAAGATGAAGAATTGGGTTCAGGCTGTTAAGGTTGTTGTAGGGGTTTTGCTGAGTGGGGAGAAGAGGCTGTGTGATAGTTTGTTTGGTGATGTGGATGATTTGAAGGAGATTTGTTTCAATGAGACTGCTAAGGGGTGTGTGATGCAGTTGCTGAACTTCGGGGAGGCTATTGCTATTTGTAAGCGCTCCCCCGAGAAGTTGTTTAGGATATTGGATATGTATGAGGCTTTGAGGGATGCTATGCCTGATTTGCAGGCCATGGTGAGTGACGAGTTTGTGATTGTTGAGGCCAATGGAGTGTTGAGGGGTCTTGGTGAGGCTGCCAAAGGGACTTTTGCTGAGTTTGAGAATTGCATTAGGAATGAGACCTCCAAGAAGCCGGTCATAACCGGGGATGTTCATCCCTTGCCTCGTTATGTCATGAATTACCTCAAGTTGCTTGTTGATTATGGTGACCCTATGGATTCGCTTTTGGAGCTCAGTGAGGAGGATCTCTATCGATTTAAAAATGATCTCAGAGGCGATAGTTCCCGGTTGGAGGCTATGTCCCCCTTGGGGCAGCGGATTCTGTTGCTCATGTCTGAGCTTGAGTATAATCTTGAGGAGAAGTCGAGGCTTTATGAAGACGCTGCAATGCAGCAGGTGTTTTTGATGAACAATTTGTATTACCTTGTGCGGAAAGTGAAGGACTCGGATCTTGGGAAGGTCTTGGGGGATGACTGGATTAGGAAGCGGCGTGGTCAGATACGCCAGTATGCTACAGGGTATCTGAGGGCCTCTTGGAGCAAGGCCTTATCTTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAATAATGCTTCAAAGATGGCTTTGAAGGAGAGGTTCAAGAGTTTCAATGCTTGTTTTGAAGAAATTTATAGGGTGCAGACAGCTTGGAAGGTACCCGATGATCAGCTTCGGGAGGAGATGCGGATATCCATTTCAGAGAAGGTGATTCCTGCATACCGCTCGTTTGTGGGGAGGTTTAGGAGTCAGTTAGAGGGGAGGCATGCGGGCAAATACATTAAGTATACACCAGAGGATCTAGAGACCTATCTATTAGATTTATTTGAAGGATCCCCTGCTGTATTGCATCACATAAGGAGGAAAAGTACATAG 1905 0.5165 MATTTSLGGAAAGGDDRVLATAQQIVKSLRAAKEDREDMLLIFSTFDNRLSGISDLINGDDSKSSDEEDLGNFEAAEKVILADASLSGEPSRQSTSLFNPPNNPAEYLSAVDEIIHWMEHLSVAPPSSSAARTGQIIVDRAENAIQLAMLRLEDELRHVLICNTIPLDAVSRYGSIRRRGVSLGDDLFVDLVRPEAVQDLREIIDRMFRSGYERECLQVYSSVRRDALDECLVILGVERLSIEEVQKVEWRSLDEKMKNWVQAVKVVVGVLLSGEKRLCDSLFGDVDDLKEICFNETAKGCVMQLLNFGEAIAICKRSPEKLFRILDMYEALRDAMPDLQAMVSDEFVIVEANGVLRGLGEAAKGTFAEFENCIRNETSKKPVITGDVHPLPRYVMNYLKLLVDYGDPMDSLLELSEEDLYRFKNDLRGDSSRLEAMSPLGQRILLLMSELEYNLEEKSRLYEDAAMQQVFLMNNLYYLVRKVKDSDLGKVLGDDWIRKRRGQIRQYATGYLRASWSKALSCLKDEGIGGSSNNASKMALKERFKSFNACFEEIYRVQTAWKVPDDQLREEMRISISEKVIPAYRSFVGRFRSQLEGRHAGKYIKYTPEDLETYLLDLFEGSPAVLHHIRRKST 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01722 634 Coils Coil 448 468 - -
Cca11g01722 634 Gene3D Exocyst complex component Exo70 92 626 - -
Cca11g01722 634 Pfam Exo70 exocyst complex subunit 258 616 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca11g01722 634 SUPERFAMILY Cullin repeat-like 97 620 IPR016159 -
Cca11g01722 634 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 72 626 - -
Cca11g01722 634 PANTHER EXOCYST COMPLEX PROTEIN EXO70 72 626 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01722 Cca-Chr11 41746415 41748533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01722 16 633 EXO70 exocyst subunit family AT5G50380 58.136 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01722 K07195 - gmx:100818693 1120.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01722 11 41746415 41748533 Cca11g01722 11 41746415 41748533 ECH
Cca03g00280 03 4175482 4180588 Cca11g01722 11 41746415 41748533 PCT