Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01720 ATGCATGAGATTTCCTACATTATATATTTGGGATCACATTCTTTTGGTCCAAATCCTTCCTCAGTGGATGTTGAATCTGTCACGAACTATCACTATGAATTACTTGGATCATTCGTTGGAAGCAGCGAAAAAGCCAAAGAAGCAATCTTTTATTCTTACGGTAGATATATTAATGGCTTTGCTGCAGTACTTGATGAAGATGTAGCGGCCTACGTTGCAAAGCATCCGAATGTAGTATCAGTTTTCTTAAACAAAGAGCACAAATTGCAGACAACACATTCTTGGGATTTCCTTGGGTTAGAGAAAAATGGTGAATTTCCACATGCCTCAGCATGGCGGAAGACAATGGGTGAAGATATCATTATTGGAAATATAGACTCAGGTGTTTGGCCTGAATCTAAGAGTTTTGGTGATGAAGGGTTCGGACCCATCCCAAAACGGTGGCGTGGAATCTGTCAAACAGAAGATAATTTTCATTGCAACAGGAAGCTTATTGGAGCAAGATATTTTTACAAAGGTTTTGAGGCAAATACTGGTAGAAAAGTGAATGATTCGATGCTTGGTGCACGTGACTATGAAGGTCATGGTTCACACACTTTATCAACAGCTGGTGGTAACTTTGTTCATGGAGCTAGTGTTTTTGGCTTTGGAAATGGAACTGCAAGTGGTGGATCACCAAAAGCTCGAGTTGCAACCTATAAGGTGGTCTGGCCATATTCTACATTGCCCGGTAGTGGATGTTATGATGCAGACATTTTGGCTGCTTTTGAGGCTGCCATAGGTGACGGCATTGATGTGCTTTCGGTGTCTTTGGGCTCATCTGAACCCTCCGAATATTCCAAAAACGGTATATCCATAGGGTCTTTCCATGCAGTTGCTAACGGCATAATAGTTGTGGCTTCTGCAGGAAATGATGGGCCTCAATCTGGATATGTATCCAACGTTGCACCGTGGATCCTCACAGTTGCTGCAAGCACAATTGATAGGGACTTCTCTAGTTATGTTACACTTGGTGACAACAAAATCATCAAGGGAGCTAGCCTTTCAGAGTATGACATACCATATAATATGAAGTACCCGTTGATCAGTGCTGTTGATGCCAAAGCTAATGATGAAACTGCTGATGGAGCTCCTTTTTGCCTGAATGAAACTCTTGATGCTGAGAAGGTGAAGGGAAAAATATTGGTCTGTCTTCTCGGTGGTGGTAATGGTAGAATTGAGAAGGGTGAGGTAGCTGCTGGTTTAGGTGCTGTTGGAATGATTTTGGTTAATGATGAGGACTCAGGAAGTGAAATTTTCCCTGACCTCCATGTGCTTCCTGCTTCACAGGTTGACTTTGTGAGCGGCAGTTACATTTATAATTACATCAACCTCACCATGTCTCCTGTGGCATACATTTCTAGGGTGAAAACAGAATTGGGTGAAAAGCCTGCTCCATATGTGGCTCCATTTTCATCAAGGGGCCCCAGTCTATTTGAGTCAGCAATCCTCAAGCCTGATGTGACTGCACCAGGAGTCAACATCATTGCTGCTTTTAGTGAAGCTGTATCTCCCACAGAACTAGATTCTGACAAAAGAAGAACTCCTTTCATTACTATGTCTGGAACTTCAATTTCATGTCCTCATGTTGCTGGCCTTGCTGGGTTGATCAAAGCCCTTCATCCTGATTGGAGCCCAGCTGCTATTAAGTCAGCAATCATTACCTCAGCAAATAAAATAGATAACACTGGAAGGCCTATCCTGAATTCATCATTATCGAACGAGGCAACTCCATTTGACTATGGTGCAGGGTACATTGAACCTAATCTTGCTGTGGAGCCTGGACTTGTATATGACATGGATATGACTGATTACATGAACCATTTGTGTGGTCGTGGCTACGACAGCTCCCAGCTTATGATGTTTTACGGGAAGCCTTACACTTGTCCAGAGTTGTTCAATCTTGCAGATTTCAACTACCCAACAATCAGAGTTCCTCGGCTTCACCCTGGAGATTCTGTGAACGTTACTCGAACCGTTACTAATGTTGGGTCACCAAGCACGTATAGAGCGAGCATGGAGGCACCACCACAAGTTCTACTCTGGATTGAGCCTATGGAACTCATGTTCAAGGAAAAGGGTGAAAAGAAGGAGTTCACAATTACATCGACATTGATGCCGGAAACTGAGAGCACCACTGATTACGTCTTCGGGTGGTTGACGTGGTTTGATGGCAAACACCGTGTGAGGAGTCCTATGGTATTTCACATTAAGTGA 2256 0.4331 MHEISYIIYLGSHSFGPNPSSVDVESVTNYHYELLGSFVGSSEKAKEAIFYSYGRYINGFAAVLDEDVAAYVAKHPNVVSVFLNKEHKLQTTHSWDFLGLEKNGEFPHASAWRKTMGEDIIIGNIDSGVWPESKSFGDEGFGPIPKRWRGICQTEDNFHCNRKLIGARYFYKGFEANTGRKVNDSMLGARDYEGHGSHTLSTAGGNFVHGASVFGFGNGTASGGSPKARVATYKVVWPYSTLPGSGCYDADILAAFEAAIGDGIDVLSVSLGSSEPSEYSKNGISIGSFHAVANGIIVVASAGNDGPQSGYVSNVAPWILTVAASTIDRDFSSYVTLGDNKIIKGASLSEYDIPYNMKYPLISAVDAKANDETADGAPFCLNETLDAEKVKGKILVCLLGGGNGRIEKGEVAAGLGAVGMILVNDEDSGSEIFPDLHVLPASQVDFVSGSYIYNYINLTMSPVAYISRVKTELGEKPAPYVAPFSSRGPSLFESAILKPDVTAPGVNIIAAFSEAVSPTELDSDKRRTPFITMSGTSISCPHVAGLAGLIKALHPDWSPAAIKSAIITSANKIDNTGRPILNSSLSNEATPFDYGAGYIEPNLAVEPGLVYDMDMTDYMNHLCGRGYDSSQLMMFYGKPYTCPELFNLADFNYPTIRVPRLHPGDSVNVTRTVTNVGSPSTYRASMEAPPQVLLWIEPMELMFKEKGEKKEFTITSTLMPETESTTDYVFGWLTWFDGKHRVRSPMVFHIK 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01720 751 SUPERFAMILY Subtilisin-like 89 609 IPR036852 GO:0004252|GO:0006508
Cca11g01720 751 Gene3D Peptidase S8/S53 domain 119 618 IPR036852 GO:0004252|GO:0006508
Cca11g01720 751 Pfam Peptidase inhibitor I9 5 89 IPR010259 -
Cca11g01720 751 Gene3D - 328 473 - -
Cca11g01720 751 Pfam Subtilase family 117 579 IPR000209 GO:0006508|GO:0008236
Cca11g01720 751 ProSiteProfiles Serine proteases, subtilase domain profile. 94 605 - -
Cca11g01720 751 SUPERFAMILY PA domain 387 430 IPR046450 -
Cca11g01720 751 ProSitePatterns Serine proteases, subtilase family, serine active site. 535 545 IPR023828 -
Cca11g01720 751 Pfam PA domain 359 450 IPR003137 -
Cca11g01720 751 Pfam Fibronectin type-III domain 650 747 IPR041469 -
Cca11g01720 751 Gene3D - 622 750 - -
Cca11g01720 751 CDD PA_subtilisin_like 334 466 - -
Cca11g01720 751 CDD Peptidases_S8_3 87 571 IPR034197 -
Cca11g01720 751 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.3 4 747 - -
Cca11g01720 751 PRINTS Subtilisin serine protease family (S8) signature 534 550 IPR015500 -
Cca11g01720 751 PRINTS Subtilisin serine protease family (S8) signature 191 204 IPR015500 -
Cca11g01720 751 PRINTS Subtilisin serine protease family (S8) signature 117 136 IPR015500 -
Cca11g01720 751 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 747 IPR045051 -
Cca11g01720 751 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 90 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01720 Cca-Chr11 41718533 41722091 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01720 5 750 Subtilisin-like Serine Gene Family AT5G59810 55.615 0.0 799
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01720 - - vun:114175516 1050.81