Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01719 ATGTTACCATCCATTTCTCACGTGTTATTGTCACTTATTCTTTGCGTTCTGCTGCTAGATCCCATCCTAGCAATCAAACAGTCCTATATTGTATACTTGGGATCACATTCTTTTGGTCCAAATCCTTCCGCCATTGATGCTGAATTTGTCACCGACTCTCACTATGATTTGCTTGGATCATTCGTTGGAAGCACTGAAAAGGCCAAAGAAGCAATCTTTTATTCTTATAATAGATATATTAATGGCTTTGCTGCAGTACTTGATGAAGATGAAGCAGCCAACGTTGCAAAGCATCCGAGTGTAGTATCAGTTTTGTTAAACAAAAAACGGAATTTGGACACAACACGTTCATGGGATTTCCTTGGGTTAGAGAGAAATGGTGAATTTCCAGAAGCCTCAGTATGGCGGAAGACAAAGGGTGAAGATATCATTATTGGAAACATAGACACAGGTGTTTGGCCTGAATCCAAGAGTTTTAGTGATGAAGGGTTCGGACCCATCCCAAAAAGGTGGCGTGGAATCTGTAAAACAGAAGATAAAGTTCGGTGCAATAGGAAGCTTATTGGAACAAGATATTTTGCCAAAGGTTTAGAGGCAAGTATTGGTAGAAAACTTAATGGCTCGATACTTAGTGCACGTGACTATGAAGGTCATGGTTCACATACTTTATCAACAGCTGGTGGCAACTTTGTTCATGGAGCcaatgcatttggcaatggcaatggaactgcaagtggTGGATCACCAAAAGCTCGAGTTGCAGCATATAAGGCGTGCTGGCCACAAGATATCTTCGGTGGTGGATGTTTTGAGGCTGACATTTTGGCTGCTCTTGAGGCTGCCATAAGTGATGGCGTGGATGTGATTTCCATGTCTTTGGGTTCAGATTCACCCCCAGAATTTTATCAAATAGTTGCTTCATCAGGAAATTCAGGACCTTCTCCAGCAACTATAGGCAACAATGAACCTTGGATTCTCACAGTTGCTGCAAGCACAATTGATAGAAACTTCGCTAGTTATGTCACACTCGGTGACAAGAAAACTTTTAAGGGAGCTAGCCTTTCAGAGCATGGCTTACCATCTAATAAGATGTACCCGTTGATCGGTGCTTTCGATGCCAGTCTTGATAAAGAAGTTGCTATGGCAGCTCCTTATTGCCTGAATGGAACTCTTGATGCTAAGAAGGTGAAGGGGAAAATATTGGTATGTCTTCGAGGTGGTGGTTTTGGTAGAACTGCGAAGGGTGAGGTGGCTGCTAGTGTTGGGGCTGTTGGAATGATTTTGGCTAATGACGAGGAGTCAGGGAATGAGATCATATCCGATCCTCATGTGCTTCCTACTACACAGGTTGACTTCACCAGTGGCACTTACATTTATAATTACATCAACCGCACCAAGTCTCCTGTGGCATACATTTCAAGGGTGAAAACAGAATTAGGAGTAAAGCCAGCTCCATATGTGGCTTCATTTTCATCAAAGGGTCCAAATCATTTTGAACCAGCAATCCTCAAGCCTGATGTGACTGCACCAGGAGTCAACATCATTGCTGCTTATAGTGAAGCTGTATCTCTCACAGAGCTAGATTCTGACAAACGAAGAACGCCTTTCTTTACTTTGTCTGGAACTTCAATGTCATGTCCTCATGTCGCTGGCCTTGCTGGGCTTCTCAAAGCCCTTCATCCTGATTGGAGTCCAGCTGCCATTAAGTCAGCAATCATTACCTCAGCAACCACACTAGATAACTCTAGAAAGCCAATCCTGGATGAATCATTGAACAAGGCAACTCCATTTGACTATGGTGCAGGGCACATTCAACCTAATCGTGCTATGAACCCTGGACTTGTATATGACTTGAATATTACTGATTATTTGAACTTTTTGTGTGGTCGTGGCTACAACAGTTCACAGCTGAAAATGTTCTACGGCAAGCCTTACACTTGTCCAAAGTCGTTCAATATTGCAGATTTCAATTATCCGGCAATCACAATTCCAAAATTTGGCCCTGGACATTCTATGAATATCACTCGAACTGTTACCAATGTTGGGTCCCCAAGAACGTACAAGGTGCACATCAAGGCACCACCACAAGTTCGAGTTTCGGTTGATCCTAGGGAATTGATCTTCAAGGAAAAGGGTGAAAAAAAGGAGTTCAGAGTTACAATGACATTGAAGCCGCAAAGTATGAACACAAGTGATTACGTATTCGGGTGGTTGACATGGAGTGATGGCAGGCACCAACGTGTCAGGAGTCCTATTTCAGTTAACCTTACACAATGA 2277 0.4216 MLPSISHVLLSLILCVLLLDPILAIKQSYIVYLGSHSFGPNPSAIDAEFVTDSHYDLLGSFVGSTEKAKEAIFYSYNRYINGFAAVLDEDEAANVAKHPSVVSVLLNKKRNLDTTRSWDFLGLERNGEFPEASVWRKTKGEDIIIGNIDTGVWPESKSFSDEGFGPIPKRWRGICKTEDKVRCNRKLIGTRYFAKGLEASIGRKLNGSILSARDYEGHGSHTLSTAGGNFVHGANAFGNGNGTASGGSPKARVAAYKACWPQDIFGGGCFEADILAALEAAISDGVDVISMSLGSDSPPEFYQIVASSGNSGPSPATIGNNEPWILTVAASTIDRNFASYVTLGDKKTFKGASLSEHGLPSNKMYPLIGAFDASLDKEVAMAAPYCLNGTLDAKKVKGKILVCLRGGGFGRTAKGEVAASVGAVGMILANDEESGNEIISDPHVLPTTQVDFTSGTYIYNYINRTKSPVAYISRVKTELGVKPAPYVASFSSKGPNHFEPAILKPDVTAPGVNIIAAYSEAVSLTELDSDKRRTPFFTLSGTSMSCPHVAGLAGLLKALHPDWSPAAIKSAIITSATTLDNSRKPILDESLNKATPFDYGAGHIQPNRAMNPGLVYDLNITDYLNFLCGRGYNSSQLKMFYGKPYTCPKSFNIADFNYPAITIPKFGPGHSMNITRTVTNVGSPRTYKVHIKAPPQVRVSVDPRELIFKEKGEKKEFRVTMTLKPQSMNTSDYVFGWLTWSDGRHQRVRSPISVNLTQ 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01719 758 ProSiteProfiles Serine proteases, subtilase domain profile. 117 610 - -
Cca11g01719 758 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 113 IPR037045 -
Cca11g01719 758 CDD PA_subtilisin_like 340 472 - -
Cca11g01719 758 SUPERFAMILY PA domain 389 465 IPR046450 -
Cca11g01719 758 SUPERFAMILY Subtilisin-like 113 614 IPR036852 GO:0004252|GO:0006508
Cca11g01719 758 Gene3D Peptidase S8/S53 domain 142 623 IPR036852 GO:0004252|GO:0006508
Cca11g01719 758 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 12 755 - -
Cca11g01719 758 Pfam Fibronectin type-III domain 655 754 IPR041469 -
Cca11g01719 758 PANTHER PEPTIDASE S8 12 755 - -
Cca11g01719 758 Pfam Peptidase inhibitor I9 28 112 IPR010259 -
Cca11g01719 758 CDD Peptidases_S8_3 112 577 IPR034197 -
Cca11g01719 758 Pfam PA domain 386 456 IPR003137 -
Cca11g01719 758 Pfam Subtilase family 140 580 IPR000209 GO:0006508|GO:0008236
Cca11g01719 758 Gene3D - 334 479 - -
Cca11g01719 758 Gene3D - 627 757 - -
Cca11g01719 758 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Cca11g01719 758 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Cca11g01719 758 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Cca11g01719 758 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01719 Cca-Chr11 41685741 41706969 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01719 17 757 Subtilisin-like Serine Gene Family AT5G59810 56.464 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01719 - - ccaj:109807325 1085.48