Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01712 ATGGAAGACGAAGTCAACAGAGAACTCGAcctcctcccgccgtcgcgctccgattcctcccttctccacctgcactcctcgtcctcctccaccACAGAGTGCGGCGGCGCCCCCTCGCTCGACCTGCAGCTCTCGATCAGCGTGCGTCCGCCGGCGGTGCTGATGTGCGACGGCGTGGAGGCGCTCAAGTGGCAGGCGGCGGAGCAAATCCGTCTGGCGGCGATGGAGAAGGCGTACGCGGAGCGTGTGCGCGAGCTGACGCGGCGCGAGATGGAGATGGCGCAGTCGGAGTTCGCACGTGCGCGCCAAATGTGGGAGCGTGCGAGGGAGGAGGTCGAGAAGGCGGAGAGAATGAAGGAGCGTGCGACGAGACAGGTGGATTCCACGTGCATGGAGATCACTTGCCATTCCTGTAGGCAAAGGTTCAGGCCCAGGCCCGCTTAA 444 0.5495 MEDEVNRELDLLPPSRSDSSLLHLHSSSSSTTECGGAPSLDLQLSISVRPPAVLMCDGVEALKWQAAEQIRLAAMEKAYAERVRELTRREMEMAQSEFARARQMWERAREEVEKAERMKERATRQVDSTCMEITCHSCRQRFRPRPA 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01712 147 MobiDBLite consensus disorder prediction 19 37 - -
Cca11g01712 147 PANTHER OS03G0310200 PROTEIN 1 144 IPR039288 GO:0009630
Cca11g01712 147 Coils Coil 84 132 - -
Cca11g01712 147 PANTHER OS03G0310200 PROTEIN 1 144 - -
Cca11g01712 147 MobiDBLite consensus disorder prediction 1 37 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01712 66 143 C2H2 Transcription Factor Family AT2G01940 39.241 4.30e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01712 - - gmx:100819947 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01712 11 41571685 41572537 Cca11g01712 11 41571685 41572537 ECH