Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01696 ATGGCTTCTAGTGGTGGCAAAGGCAAACCTTTGTGTAATCATTCTCTAATGCACCTCCCAAAACGCTCCGTTTTGCTGAAGGACTACCTCATGAGGGACGACCTCAGTTCGTGTTCATCGAACGGTTTTAAATCGTTCCCGCGGCAACAGTGCTGCACAAGCGTGGGATTTCAACGCAAACGAAGGAATGCACTCCCTCGACCACGTTCCACGTCTTCTTATTCGGCTCTGCAGAGAGCTTCGGGAGCCATAATGAAGGCTATAAAGTCACTCCCCTTGTCACAAAAGAAAACCAAGAAAGCTTCCACCGGTCTTCTTTCTAGAAGCTTCTCGAGGAAGCTGTTGAGTAGAAGCTTCTGGAGAAAGGCGGCGAGGGAGGAGGGAAGCGAAGGTGTGCCGCGGAGGAGGAGATCTTTCCGCGAACTCATCATGCAGGATCAGGAGCATCGTAAAGCGACGTCGTTGAATGAGGATATTGTGTTCTCTGCACGTGCCACGAGCATCACCACCTCTTCCGGCTGCGGTAGTGACAGCTGGGGAGAGAGTGAATTCACTTTTGCTTCCACCGCTGCTTCCTCTGAGACCTCCAATGAAAACTACCTCGTACTTGAGGGCACCAAAGAGGGTGCACGTGCACCTCATCACAAGGTGGAACCAGTGGTAGTAACCAAGGAATACTGGGCAAATGAGAAGGAACAATTTAGTCCTGTATCGATACTGGATTGCCCATTTGAAGATGAAGATGATATTTACAATTCTCATTTCAATTCCACTTCGACTATTCTTTCCTTTTCTGAAGGCGCCAAACACAAACATATGCAGAAAAGACGGCATTTTGAAAGCGCGACTCAACTGGAGCCGGTGGTTTTAGAGAAAAGGTTCGCGCGGTTAGAGTTGAAGGATGAACCACACAATCATTCTTCAAAACAATGCTCCATATTAAAGCGTAACGATAACAAGTTGCGTCGTGACAACATTGGCATCATCGAGGAAAATGCTCGCGATCTCCTAAACTTCGTTAAAAGGTCAATACCATCAAACAGTTTGATAGTTAAGGCAGAGAACCTGCTGTTTGATTTCTTCAAGCAGAGTATTGGTGAAAGTGAAGACATTGATCACTCAAAGAAGTTTCAACTTTGCAAGGTAGCGGAAGATTGGATACATGGGCAACCCCAGGAACAGTATTTGGGTTGGGAAGTGCAGGGAGGAAGGTGCGTCTACATTAGCGAGATGGACAAGTGTGGGGAATGGAAGAACTTTGATAAAGAAATTCAACAATTGGCAATGGAGTTGGGAAACGAGGTCTTGGCAAATTTGGTTAATGAGTTGGTACTTGACCTCACCACACATGCTAGTCACTGA 1362 0.467 MASSGGKGKPLCNHSLMHLPKRSVLLKDYLMRDDLSSCSSNGFKSFPRQQCCTSVGFQRKRRNALPRPRSTSSYSALQRASGAIMKAIKSLPLSQKKTKKASTGLLSRSFSRKLLSRSFWRKAAREEGSEGVPRRRRSFRELIMQDQEHRKATSLNEDIVFSARATSITTSSGCGSDSWGESEFTFASTAASSETSNENYLVLEGTKEGARAPHHKVEPVVVTKEYWANEKEQFSPVSILDCPFEDEDDIYNSHFNSTSTILSFSEGAKHKHMQKRRHFESATQLEPVVLEKRFARLELKDEPHNHSSKQCSILKRNDNKLRRDNIGIIEENARDLLNFVKRSIPSNSLIVKAENLLFDFFKQSIGESEDIDHSKKFQLCKVAEDWIHGQPQEQYLGWEVQGGRCVYISEMDKCGEWKNFDKEIQQLAMELGNEVLANLVNELVLDLTTHASH 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01696 453 PANTHER OS04G0572500 PROTEIN 15 447 - -
Cca11g01696 453 PANTHER OS04G0572500 PROTEIN 15 447 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01696 22 448 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 31.624 2.83e-40 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01696 - - gmx:102663212 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01696 11 41319422 41323561 Cca11g01696 11 41319422 41323561 ECH