Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01692 ATGAGTGAAATGGGTAGGAGTGAGGAGATGGAAGGAGAAGAAAAAGGAGGAAGAAGGGAGCTGAGCAGGAGCGACGGAGAGAAAGAGAAAAACACAACAGGGTTCCAAGTCTTGCCCCCCAAGGAGGAGCCAACAGATTCCGACCCCAACCCGGGGGTTCTTCCGCTGCCGCTCAAACCAACCaggcgcgcctccaccaaggaccgccacaccaaagtggagggccgcggccgcaggatccgaatacccgccacctgcgccgcccggatcttccagctcacgcgcgagctcggccacaagtccgacggcgaaaccgtccgctggctcctcgagcacgccgagcacgccatcatcgaggccaccggcaccggcaccgttccggCCATCGCGGTCTCCGTGGGAGGCACTCTTAAAATCCCCACTACCTCCTCCTCCGCCGCCGAGGAGAAGAAGCGGAAACGGCCCTCCAGCAGCGAGTTCGTGGACGTGAACGTGAAGGAGGGCGTTTCGCAGTCGTCCGGTCTGGCCCCGGTTCAAGGTGTGGTCTCGGTCTGGGCCGTGGGTAACCCGAGCATGGTGGTCCCCGCGAACACCTTGTGGATGATCCCCCAGGCCGCCACCACAACTAACCCGTTGGGCCCCGCCAGCCACCAACCCCAGATATGGGCCTTATCCCCTTCCGTGTTCAACGTGGCGCCCAGGCCCATATCCACGAATATTCCAGAAGGTTGGCCCGTTGTGGCGCCTTCCAGTAACGGTTCTAACTCCGCCGTGGTGGGAGCTAAGGTGGCAGCCAAATCCAGCATGGCACCTTCCAGCGCTAGTGCTAGTGGCAAGGCTCAGATGTTAAGGGATTTTTCCCTCCAAATTTACGATAAGCAAGAGTTGCAGTTCATGGACCGTTCCAATCGATAA 915 0.4536 MSEMGRSEEMEGEEKGGRRELSRSDGEKEKNTTGFQVLPPKEEPTDSDPNPGVLPLPLKPTRRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEHAIIEATGTGTVPAIAVSVGGTLKIPTTSSSAAEEKKRKRPSSSEFVDVNVKEGVSQSSGLAPVQGVVSVWAVGNPSMVVPANTLWMIPQAATTTNPLGPASHQPQIWALSPSVFNVAPRPISTNIPEGWPVVAPSSNGSNSAVVGAKVAAKSSMAPSSASASGKAQMLRDFSLQIYDKQELQFMDRSNR 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01692 304 MobiDBLite consensus disorder prediction 1 75 - -
Cca11g01692 304 MobiDBLite consensus disorder prediction 1 30 - -
Cca11g01692 304 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 14 302 IPR005333 GO:0003700
Cca11g01692 304 Pfam TCP family transcription factor 65 151 IPR017887 -
Cca11g01692 304 ProSiteProfiles TCP domain profile. 66 120 IPR017887 -
Cca11g01692 304 PANTHER TRANSCRIPTION FACTOR TCP9-LIKE 14 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01692 Cca-Chr11 41248386 41249790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01692 1 299 TCP Transcription Factor Family AT2G45680 43.944 4.56e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Cca11g01692 TCP 8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01692 - - ccaj:109808746 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01692 11 41248386 41249790 Cca11g01692 11 41248386 41249790 ECH