Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01682 ATGATTCTCCACTCAGCTTTCCTTCAAAGCCTCTTAACAGTTGAGTATTGGCAAAACCAAATCACACCCATCCTTCTAGCATTCTTCCTCATTTCCGCCCTCACTTCCTACGCATGGCTCAAGCCCAAGGCCCAAACCCTGCCACCGGGTCCACCGGGCCTCCCTATCTTCGGGAACCTTCTATCCTTGGACCCACAACTCCACACTTACTTCGCCGCCCTGGCCCAGATCCACGGCCCAATCTTCAAGCTCCAACTCGGGAGCAAGCTCGGCATCGTCTTGACTTCACCGCCCATGGCCCGCGAGGTGCTCAAAGACCACGACATCGTTTTCGCCAACCGCGACGTTCCCGCCGCCGGAAGGGTAGCCACCTACGGCGGCTCCGACATAGCGTGGAACCCGTACGGCCCCGAGTGGCGGATGCTGAGGAAAGTGTGCGTGCTGAAGATGCTGAGCAACACTACCCTGGACTCCGTGTACGATCTCCGGCGCAATGAGATGCGCAAAATGGTGGCGTATTTGCAGGAGCGAGTGGGGAGGCCGGTGAAAGTGGGGGAACAGGTGTTTCTGACGTTGCTGAATGTAATAACGAATATGATGTGGGGCGAGGCGGTGGAAGGGGCGGAGAGGGAGAGGTTGGGGGCGGAGTTCAGGGAGTTGGTGGCGGAGATGACGCAGCTTCTGGGGAAGCCGAACGTGTCGGACTTCTTTCCCGGGTTGGCAGGGTTGGATTTGCAAGGTGTGGAGAAAGAGATGCGTGGTTTGGTGTGTCGGTTCGATGGGATATTTGAGAAGATGATCGGCGAACGAAGGAGGGTGAAAGGGGAAGAAGAAAGGAAGGAGAAAGACTTTCTCCAGTTTCTGTTGAATTTGGAGGAGGAAGGCTCCGGCGCTGATTCCAAGACGCCGCTTACCATCACCCACGTTAAGGCTCTGCTCATGGATATGGTCACAGGGGGAACTGATACATCCTCAAATACAATTGAGTTTGCAATAGCAGAAATGATGCACAAGCCAGAGGTAATGATGAGAGTCAAAGAGGAGTTGGAATTTGTTGTAGGGACAGATAACAAAGAGTCTCACATTCCTAAGTTGTCCTATTTGCAAGCTGTGATGAAAGAAACACTTCGATTGCACCCTGTACTTCCACTTCTGATCCCTCATAGCCCTAGTGAAACCACCATTGTGGGTGGCTACACAATTCCAAAGGGGTCTCGAATGTTTTTAAATGTGTGGGCTATTCACAGAAACCCTTCAAGTTGGGAGAAACCACTCGAATTTGATCCAACAAGATTCTTAAATGCCAAATGGGATTATAGTGGCAATGACTTCAATTATTTTCCTTTTGGATCTGGAAGAAGAATTTGTGCAGGAATAGCAATGGCTGAGAGGACAGTTTTATATTTTCTTGCCATACTTATGCACTTATTTGATTGGACAATACCTCAAGGACAAAAATTAGATGTTTCAGAAAAATTTGGCATTGTTCTAAAAAAGAAAGTTCCTCTTGTTGTCATCCCCACTCAACGATTATCCAACCCAAATCTTTATCATTGA 1557 0.4958 MILHSAFLQSLLTVEYWQNQITPILLAFFLISALTSYAWLKPKAQTLPPGPPGLPIFGNLLSLDPQLHTYFAALAQIHGPIFKLQLGSKLGIVLTSPPMAREVLKDHDIVFANRDVPAAGRVATYGGSDIAWNPYGPEWRMLRKVCVLKMLSNTTLDSVYDLRRNEMRKMVAYLQERVGRPVKVGEQVFLTLLNVITNMMWGEAVEGAERERLGAEFRELVAEMTQLLGKPNVSDFFPGLAGLDLQGVEKEMRGLVCRFDGIFEKMIGERRRVKGEEERKEKDFLQFLLNLEEEGSGADSKTPLTITHVKALLMDMVTGGTDTSSNTIEFAIAEMMHKPEVMMRVKEELEFVVGTDNKESHIPKLSYLQAVMKETLRLHPVLPLLIPHSPSETTIVGGYTIPKGSRMFLNVWAIHRNPSSWEKPLEFDPTRFLNAKWDYSGNDFNYFPFGSGRRICAGIAMAERTVLYFLAILMHLFDWTIPQGQKLDVSEKFGIVLKKKVPLVVIPTQRLSNPNLYH 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01682 518 Pfam Cytochrome P450 48 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01682 518 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01682 518 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01682 518 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01682 518 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01682 518 PANTHER OS08G0547900 PROTEIN 16 518 - -
Cca11g01682 518 Gene3D Cytochrome P450 36 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01682 518 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01682 518 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01682 518 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01682 518 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01682 518 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01682 518 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01682 518 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01682 518 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01682 518 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01682 518 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 16 518 - -
Cca11g01682 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Cca11g01682 518 SUPERFAMILY Cytochrome P450 48 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01682 Cca-Chr11 41045015 41108646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01682 18 517 Cytochrome P450 AT4G12300 57.087 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01682 - - gmx:100783085 801.586