Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01646 ATGGCAGCAAAACTTGTAGGCTTTTGTTTTGTAATCCTAAACGTGGTCCTTCACGTATCAACAAGCAGTGGGCAAGGCGAGCAACAGCAAGCCCTAACGGCCCTCTCCGCGAGCGTGACAAAGACCCAATCATGCATAGCGTTCCTGAAGACATTGAGCCCGGCGAACAAGGCGGTGCAAGACTGCATAGAGACCATAACTAGCAGCGTGGACCATCTGACCAAATCGGTTAAGGAGCTTGGGCTTGTGGGTAAGCCCAATGAGGATTTAGCGTTGCACGTCAATAATGTCAAGACTTGGGTTAGCGCTGCCATCACCGATCAAACCGACTGTCTTGACGGGCTTGATGGGCCCAACGCGGATGCCAAACTAAGGGACTCCATTAGGCCCAAGGTTGTTGAATCTTCTCAAGCCGTCAGTAGTGCCCTTGCGTCGATTAATCGCCTTCCCACCAAATGA 459 0.5163 MAAKLVGFCFVILNVVLHVSTSSGQGEQQQALTALSASVTKTQSCIAFLKTLSPANKAVQDCIETITSSVDHLTKSVKELGLVGKPNEDLALHVNNVKTWVSAAITDQTDCLDGLDGPNADAKLRDSIRPKVVESSQAVSSALASINRLPTK 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01646 152 Gene3D Invertase/pectin methylesterase inhibitor family protein 5 150 IPR035513 -
Cca11g01646 152 SMART PMEI_2 1 145 IPR006501 GO:0004857
Cca11g01646 152 Pfam Plant invertase/pectin methylesterase inhibitor 8 144 IPR006501 GO:0004857
Cca11g01646 152 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 7 149 IPR035513 -
Cca11g01646 152 CDD PMEI-like_3 31 151 - -
Cca11g01646 152 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 147 IPR006501 GO:0004857
Cca11g01646 152 PANTHER PECTINESTERASE INHIBITOR-LIKE 21 149 - -
Cca11g01646 152 PANTHER PECTINESTERASE INHIBITOR 9 21 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01646 Cca-Chr11 40463124 40463939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01646 32 149 Carbohydrate Esterase AT3G14310 32.773 2.84e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01646 - - ccaj:109807019 295.049