Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01642 ATGATGAGAAAGTGTGCCAACCCCAAGTATGTGATCTTGAAATTGGTGCGATGTTTTGGACAAAGAACCAATTGGTTGTGTTTGCCAGAGTGGGAACCCAAGTATGTGCAATTGGGCAAGAGCCCAATAGAGCTACCAAAGGGACACTTGGCAGTGTATGTGGGTGAATCTGAAGATGAGAAACAGCGTGTATTGGTACCGGTTACTCACTTCAATCACCCTCTGCTTGGAAAGCTATTGGAGGATGCAGAAAATGTTTACGGATTCGATCATCCTGGTGTCATAACCATACCCTGTAAAATCTCCGAGTTTGAGAGAGTTCAAAAGATTATTGCCACCACCCCAAGCTATCACAGGTGCCTTGGCACTTGTGCTTCCATCAACTTAAAATCACAGTAA 399 0.4436 MMRKCANPKYVILKLVRCFGQRTNWLCLPEWEPKYVQLGKSPIELPKGHLAVYVGESEDEKQRVLVPVTHFNHPLLGKLLEDAENVYGFDHPGVITIPCKISEFERVQKIIATTPSYHRCLGTCASINLKSQ 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01642 132 Pfam Auxin responsive protein 41 109 IPR003676 GO:0009733
Cca11g01642 132 PANTHER - 8 128 - -
Cca11g01642 132 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 128 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01642 Cca-Chr11 40425910 40426308 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01642 42 115 Calmodulin-binding Proteins AT3G43120 45.946 6.00e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01642 K14488 - gmx:102668727 189.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01642 11 40425910 40426308 Cca11g01642 11 40425910 40426308 ECH