Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01635 ATGCAAACAATGTGTGCTTACAGAGACGAGGATCCCCGTCTTCATGACCTCAAAACTAAGATTCGTGTTGTCCCAAATTTTCCTAAACCTGGTATTATGTTCCAAGACATTACTACTCTGTTGCTCGATCCCAAAGCCTTCAAGAACACGATAGATATGTTCGTTGAGCGATACAAAGGCAAAAATATTTCTGTTGTCGCAGGAATTGAAGCTCGGGGTTTCATTTTTGGTTCTCCCATTGCACTGGCAATAGGAGCAAAGTTTGTACCAATGAGGAAACCGAAAAAATTGCCTGGCAAAGTTATTTCTCAAGAGTATATTCTGGAATATGGAAGAGACTGTCTTGAGCTGCATGTTGGAGCAGTTGAACATGGTGAGCGTGCTTTAGTGGTTGATGATTTGATTGCGACTGGTGGAACACTCTGCGCTGCTATGGATTTACTTGAGCGAGTGGGAGCAGAGGTAGTGGAGTGTGCATGCGTAATTGAATTGCCAGAATTAAAGGGCCGTGAACGGTTGAACGGGAAACCCTTGTATGTGTTAGTGGAATGTTTTGAGTGCTGTCAGTAG 570 0.4351 MQTMCAYRDEDPRLHDLKTKIRVVPNFPKPGIMFQDITTLLLDPKAFKNTIDMFVERYKGKNISVVAGIEARGFIFGSPIALAIGAKFVPMRKPKKLPGKVISQEYILEYGRDCLELHVGAVEHGERALVVDDLIATGGTLCAAMDLLERVGAEVVECACVIELPELKGRERLNGKPLYVLVECFECCQ 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01635 189 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 3-RELATED 9 183 - -
Cca11g01635 189 TIGRFAM apt: adenine phosphoribosyltransferase 17 183 IPR005764 GO:0003999|GO:0005737|GO:0006168
Cca11g01635 189 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 183 - -
Cca11g01635 189 Gene3D - 4 184 IPR029057 -
Cca11g01635 189 CDD PRTases_typeI 51 183 IPR000836 -
Cca11g01635 189 Pfam Phosphoribosyl transferase domain 57 170 IPR000836 -
Cca11g01635 189 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Cca11g01635 189 SUPERFAMILY PRTase-like 15 178 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01635 Cca-Chr11 40206213 40215028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01635 10 184 PRT Gene Family AT1G27450 74.286 3.07e-95 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01635 K00759 - gmx:100791569 359.762