Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01634 ATGGCGAGTGGGTGGGTGAAGTCATGGCAGTGCAAGTCAAGAGCTTTCGAAGACGTGTACCACCCACACCCCAAAATCCTCAGTGCCAGCTGCAGAAAAGGCGTCGAGAACATCAAAGACATGATCGACATAcccaagcccaggcccagacccaagcccaagcccaagtccaagcccaagcccaagccACCCTTGGAGAAACATCCAAGCTCCAAATACCCATCGTCAAGAACCAAACCAGAAATCGAAACACGAACCCCCATGAGACGCTCCCGAAGCAGCACAACGACAACGACAACGACAACCTCGTCCCGTGGCATCATCGAACTTTCCGAGGGCCACCCTTCGCGGAACGTCGTGGAGATTATCTTCCACACCAGTTGGGGGCCCAAGCCGTTCCCGGGCCGGGTCGAGCTCATTTTCAAGGTCCAGAACGGGCCCAGGACCGTGTCGCGGTTCGAGGAGTTTCGCGAGGCGGTGAAGGGACGCGCCGCCGCGGGGCTCGCCGAGGGGAACGACTGGGAGGAGAACGCGCGGTGCATCGCCGACGGGAACGAGGTAATGCGGTTCCACTGCCTGGGCCCCGTCGAGGACGGCGCTTCCTACGACGGTGCTGGCTGTGCATGGTCGTTTCCGGATCGGAAGGGGGCGGCGATCTGCACGTTTTCCGGCAGCGGCGGCGCGCACGAGACCGCCGGCGGAGGCAGGGGCAGAAAGGCTATGCTGGTTTGTCGGGTCGTAGCGGGTCGGGTTTCTAAGCAACTCGGGTTTTTGGACTCGTTGTTGGACAAGCGAGTGGGGTTCGACTCGTAA 813 0.5633 MASGWVKSWQCKSRAFEDVYHPHPKILSASCRKGVENIKDMIDIPKPRPRPKPKPKSKPKPKPPLEKHPSSKYPSSRTKPEIETRTPMRRSRSSTTTTTTTTSSRGIIELSEGHPSRNVVEIIFHTSWGPKPFPGRVELIFKVQNGPRTVSRFEEFREAVKGRAAAGLAEGNDWEENARCIADGNEVMRFHCLGPVEDGASYDGAGCAWSFPDRKGAAICTFSGSGGAHETAGGGRGRKAMLVCRVVAGRVSKQLGFLDSLLDKRVGFDS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01634 270 MobiDBLite consensus disorder prediction 59 88 - -
Cca11g01634 270 MobiDBLite consensus disorder prediction 38 107 - -
Cca11g01634 270 Gene3D - 105 269 - -
Cca11g01634 270 MobiDBLite consensus disorder prediction 89 107 - -
Cca11g01634 270 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 270 - -
Cca11g01634 270 SUPERFAMILY ADP-ribosylation 107 254 - -
Cca11g01634 270 PANTHER POLY(ADP-RIBOSE) POLYMERASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 2 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01634 Cca-Chr11 40202827 40204999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01634 21 251 C2H2 Transcription Factor Family AT2G29660 28.295 2.99e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01634 - - gmx:100792099 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01634 11 40202827 40204999 Cca11g01634 11 40202827 40204999 ECH