Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01536 ATGTCACTATTTGATGACATGGAAAGAGAGTCATCAGGGATTGTCAGCTTAATGCTAAACATGTGCTTATGGCTTGCCCTGGTTCCATTCTTCATTACTCAGGCTAATTCAGCACAAGACAAATCTGTTGCAAGGGAAGTTCTTGCTGATAATAACCCGGGTTTCATAAGCATTGATTGTGGATCGAACATCGATTACTTTGACAATGATACTGGAATTTGGTATCAAACAGACCAAGAGTTTGTGAAAACAGGAACGAATCATCTGGTTTCATCCACTGTGAACTTAAACTATGTTTACTTTGCGAGACGGTTGAACACGTTGAGATGCTTTCCAGAAGGAGAAAGGAACTGCTACAAATTGGAACCAAAGCAGGGCAAAAACAATAGGTATCTCATCAGAGCATTCTTTTCATATGGAAATTATGACGGCAAAAATGAAAACCCAGTTTTTGAACTGCATCTTGGAGTCAATTTTTGGAGAAAGGTTAATGTAAGTGCTTATTTCACCTTCGATGAGGTCATTCTCACTTCCTCATCTGATACTATAGATGTGTGCCTTGTAAAGACTGGCCCAACAATCCCTTGCATTTCTTCATTGGAATTAAGGGTTTTAAACAGTTCCAGTTATCAGAATCAGATCATGTCCGTCAGCGATCCACAACCACTGTTATTATATCAAGTTAGGACTGATGTTGGTTCCCCACAATTGCAATCGCCTGATAATGTCGAGTACAAAGATGACGCGTATGATCGGGTATGGAGGTTTGACTCAAAATACAATGAGAATGGATGGTATGACCTATATTACAATGATGTTGACATTGGAACCAACAATGGTGCTTATAAATTGCCAGCCCAAGTTTTGAGGAGTGCAGCACGATCATGGAATGTTTCCTATTCCTTGGAATTTAACTATAACGATGAGTTTTTAGACCTCGACTGGCCTTATCAGTATTATGTCTGCTTCCACTTTGCTGAAATGGAGCAACTTCCACATGGCAAAAAAAGAATAATCAATATCACCCTAAACTCCAAAACCTCACAACCTTTGGTTCTTGAATACTTGAAGCCCGTTACTCTTGAATACGTAACTCAAGGTGATGTGCGGTTTACCATTAGTGCAACGCCACAATCCGACGCTCCTCCTATCCTCAATGCCTACGAGATCTATAAGGTCATAACACAACTTGATTCACCAACTCAAGCTACAGATGTTGGAGCTATTCAGGATATCAAAAACGCGTATCAGATCACTAGATTGAATTGGCAAGGAGACCCATGTCTTCCAAAGCAATATGCGTGGGAGGGTCTCATTTGCAGCTCTGACACTAATCCAAGGATCATATCTTTGAACCTGAGCTCAAGCAAACTGACAGGGGAGATAAATACTTCATTCTCATATCTTACAGAACTAGAATTCCTGAATTTGTCACACAACGAGTTGGAAGGACCTCTGCCTGAATTTCTGGCAGAATTGCCAAAGTTAAAAGTTCTTACTCTGACAGGGAACAAGCTTTCTGGTCCAATTCCTAAGGCTCTCAAGGATAAGGCAGATAAAGCTTTGCAATTAAGTGTGGCTGACAATCTTGATCTTTGTATGACGGGTTCTTGCAAAAAGAAGAACTTTGTTGTACCACTCATTGCATCACTTGCAGCTTTAAGTGTAACCCTCTCGATTTCCCTTGGATTTTGGATATTTAGAAGATTTAAAGTTGTGCATTCTGATACCAGTTCACTAAAATCAAAACATCGAGCATTCACTTACGCTGAGATTGTCAAAATTACTGATAATTTCAAAACTACTATTGGAGAAGGAGGATTTGGAAAAGTTCACTTTGGCATTCTACAAGATCACACTAATGTGGCGGTTAAGGTGCTTTCACCATTATCAATGCAAGGTTACAAGGAATTCCGATCAGAGGTACAACATTTAATGACTGTTCATCATAGAAATTTGGTTTCTCTCATTGGGTACTGTGATGAAGGTGAAATTAAAGCGTTGATTTATGAATACATGGCCAATGGAAATCTCCAGAAACACTTATCTGTGGAAAATCCAGATGTCTTAAACTGGACTGAGAGACTTGATATCGCAGTTGATGCAGCACAGGGACTAGATTATTTGCATAATGGATGCAAACAACCTCTTATCCACAGAGATCTGAAGACTTCAAACATATTACTAGATCAAAACATGCATGCCAAGATAGCTGATTTTGGTCTATGTAGAGCTTTTGGAAATGATACTGATTCTCATATATCAACTCGTCCAGCTGGTACACTAGGTTATGTTGATCCACAATTCCAGAGAATTGGAAACTCAAATAAGAAAAGTGATATCTACAGCTTTGGAATAATTCTACTCGAGTTAGTCACTGGCCAAAAAGCACTAGCAAGAGTACACGGGAAAAACATTCACATACTTCACTGGATTGTTCCTATAGTTGAAAGAGGAGATATTCAAAGCATTGTTGATCCTAGGTTGCAGGGAGAATTCAAAGTTAGTTCTGCATGGAAATTTGTAGAAATTGCCATGTTATGCACTTCACCAACTGCAGCTGAAAGGCCAGACATGAGCAAAGTGTTGGTTGAGCTAAAGGAATGTCTATACTTGGAGATGACGGTTGAGGGAATCAGTGAAAGAGCAAGAACTGTATCTGGATTGACTTCTCCCTCAGTTAGGTAG 2688 0.3955 MSLFDDMERESSGIVSLMLNMCLWLALVPFFITQANSAQDKSVAREVLADNNPGFISIDCGSNIDYFDNDTGIWYQTDQEFVKTGTNHLVSSTVNLNYVYFARRLNTLRCFPEGERNCYKLEPKQGKNNRYLIRAFFSYGNYDGKNENPVFELHLGVNFWRKVNVSAYFTFDEVILTSSSDTIDVCLVKTGPTIPCISSLELRVLNSSSYQNQIMSVSDPQPLLLYQVRTDVGSPQLQSPDNVEYKDDAYDRVWRFDSKYNENGWYDLYYNDVDIGTNNGAYKLPAQVLRSAARSWNVSYSLEFNYNDEFLDLDWPYQYYVCFHFAEMEQLPHGKKRIINITLNSKTSQPLVLEYLKPVTLEYVTQGDVRFTISATPQSDAPPILNAYEIYKVITQLDSPTQATDVGAIQDIKNAYQITRLNWQGDPCLPKQYAWEGLICSSDTNPRIISLNLSSSKLTGEINTSFSYLTELEFLNLSHNELEGPLPEFLAELPKLKVLTLTGNKLSGPIPKALKDKADKALQLSVADNLDLCMTGSCKKKNFVVPLIASLAALSVTLSISLGFWIFRRFKVVHSDTSSLKSKHRAFTYAEIVKITDNFKTTIGEGGFGKVHFGILQDHTNVAVKVLSPLSMQGYKEFRSEVQHLMTVHHRNLVSLIGYCDEGEIKALIYEYMANGNLQKHLSVENPDVLNWTERLDIAVDAAQGLDYLHNGCKQPLIHRDLKTSNILLDQNMHAKIADFGLCRAFGNDTDSHISTRPAGTLGYVDPQFQRIGNSNKKSDIYSFGIILLELVTGQKALARVHGKNIHILHWIVPIVERGDIQSIVDPRLQGEFKVSSAWKFVEIAMLCTSPTAAERPDMSKVLVELKECLYLEMTVEGISERARTVSGLTSPSVR 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01536 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 717 729 IPR008271 GO:0004672|GO:0006468
Cca11g01536 895 ProSiteProfiles Protein kinase domain profile. 597 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01536 895 Gene3D Transferase(Phosphotransferase) domain 1 673 881 - -
Cca11g01536 895 Pfam Leucine rich repeat 450 506 IPR001611 GO:0005515
Cca11g01536 895 PANTHER OS07G0107800 PROTEIN-RELATED 49 882 - -
Cca11g01536 895 CDD STKc_IRAK 603 868 - -
Cca11g01536 895 SUPERFAMILY L domain-like 431 515 - -
Cca11g01536 895 SUPERFAMILY Protein kinase-like (PK-like) 580 866 IPR011009 -
Cca11g01536 895 Pfam Malectin-like domain 58 393 IPR024788 -
Cca11g01536 895 Gene3D - 226 394 - -
Cca11g01536 895 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 49 882 - -
Cca11g01536 895 SMART serkin_6 597 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01536 895 ProSitePatterns Protein kinases ATP-binding region signature. 603 625 IPR017441 GO:0005524
Cca11g01536 895 Pfam Protein tyrosine and serine/threonine kinase 599 864 IPR001245 GO:0004672|GO:0006468
Cca11g01536 895 Gene3D Ribonuclease Inhibitor 408 526 IPR032675 -
Cca11g01536 895 Gene3D Phosphorylase Kinase; domain 1 578 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01536 Cca-Chr11 38568439 38584764 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01536 47 894 Receptor kinase-like Gene Family AT2G19210 41.932 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Cca11g01536 Malectin_like 5.5e-78 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01536 - - mtr:MTR_8g015040 1115.52