Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01493 ATGGGAAGCGGAGTTTCAACACTGTGTTGGTGCTACCGGAGGAACGAACCGGAGCTCATATTCACTGCCACCGAGCCATTGGACGAAACCCTAGGCCACTCCTTCTGCTACGTCAGATcctccgcccgcttcctctctcccactcactccgatcgcttcctctctccctccacctccctccgcttctccccaacgcaccaccctcccacccGACCCGACTTTCACGAGACCGCCTTTAAATCCATTTCCGGAGCCTCCGTCAGCGCCAACAGCTCCATCCCCACCGCCGTCATCCACTCCGACCACGACGCCACCAAGCCCAACCTCGTCACTGGCTTCGAAAGTACGCCGTCGTTTTACGCCCTCCCGCTCCAGCCTGTTCCCCGAGGCGGCGAGCCTTCCGAGGTCAGCGGTTTCTTCCTCTCCGGACCAATTGAGTCCAACGCAGTCTCCGAGGTTCCGTTCTCCGCTCCTCTCGGCGGGCTCTACGGGAAGAAGAGCGCCAAGAAGAAGGTGATTTCGGGGTTTAGGAAAGCGTTCAACCGGAACGCGCCGGAGAAGAAGCGGCCGTGGGTGGTGCCGGTGTTGAACTTCGCCGCGAGGAAGGAAGGGCTTCCGCCTGCGCCGCCGAGTGAGAGCAATGTGCAGTGGGCGTTGGGGAAGGCTGGCGAGGATCGTGTTCACGTGGTGGTGTCGGAGGAGCAGGGGTGGTTGTTTGTTGGGATTTACGACGGTTTCAATGGCCCCGACGCGCCGGAGTTTCTGATGGGGCACCTCTACCGCGCCGTGCACGGCGAGCTTCAGGGTTTGTTCTGGGAAGCGGAAGAGGAGCCTGTGAAAACCGATGAGGTGGAAGTGAAAGGGACGGAGAGTAAACGGCGTAGGCTTTGGGAGCTTCTCGCTGAAGATGGGCTTGACCTTTCGGGTTCGGATAGGTTCGCGTTTTCCGTGGACGATGCTCTTAGTGTTAACAACGCCAATGCGGGGTCTGCTGTGAGTAGGAGGTGGTTGTTGCTGTCGAAGTTGAAGCAGGGGTTGTCGAAGCAGAAGGAAGGTCATGAGAGGCCGTGGAATTTACGGAATGaggagaaagagaaagagaaagagaaggagaaggagaataatgtggagaagATTTGTGGGAGGAAGCAGAAAGTGGGACCTGTGGATCATGGGCTGGTTTTGAGTGCTTTGTCTCGGGCGCTTCAGGAGACGGAGCATGCTTATTTGGATATGACGGATAAGCTTCTGGAGACGAATCCGGAGCTTGCTTTGATGGGTTCCTGTTTGTTGGTTGTTTTGATGAGGGATGAGGATGTGTATGTGATGAATGTTGGGGATAGTCGGGCGATTGTTGCACACTATGAACCCAAGGAGGTTGATTCCAGTGTGGAATCTGGGAGCAAGGGtgttgttggtgtgggtgttggtgttgagtccggtggtggtgCCGCGAGCATTGTTGAGGAGTCCTTGGGTTTGGGTCAAAGTGGGAGGGCGCTCAAGTTGGGGAGTGAGGGACCTGCTCAACAAATGAGGTTGGTGGCATTGCAGCTGTCTACCGACCACAGCACCAGCATTGAAGAAGAAATCATTAGGATTAAAAATGAGCATCCTGATGATACTCAATGCATAGTCAATGATAGAGTTAAAGGTCGCCTTAAGGTCACAAGAGCATTTGGGGCAGGATTTTTGAAACAGCCGAAGTGGAATGATGCAGTACTAGAGATGTTTCGTAATGAATATATTGGCACTGCTCCATATATATCCTGCTCTCCTTCACTACGTCACCATAGATTAGGCCAGAGAGATCAGTTCATGATCCTCTCATCTGATGGTTTATATCAATATCTAAACAATGAAGAAGTGGTTTCTCATGTTGAGAGCTTCATGGAAAAATTTCCAGAAGGAGATCCAGCCCAACATTTAATAGAAGAGGTGCTCCTCCGTGCTGCTAAGAAGGCTGGAATGGATTTTCATGAATTGCTGGATATCCCACAAGGAGACCGGAGGAAGTATCATGATGATGTTACTGTCATGGTGATATCACTTGAAGGGAGAATCTGGAAATCTTCAGGGAAGTATCCATGA 2091 0.4782 MGSGVSTLCWCYRRNEPELIFTATEPLDETLGHSFCYVRSSARFLSPTHSDRFLSPSTSLRFSPTHHPPTRPDFHETAFKSISGASVSANSSIPTAVIHSDHDATKPNLVTGFESTPSFYALPLQPVPRGGEPSEVSGFFLSGPIESNAVSEVPFSAPLGGLYGKKSAKKKVISGFRKAFNRNAPEKKRPWVVPVLNFAARKEGLPPAPPSESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHLYRAVHGELQGLFWEAEEEPVKTDEVEVKGTESKRRRLWELLAEDGLDLSGSDRFAFSVDDALSVNNANAGSAVSRRWLLLSKLKQGLSKQKEGHERPWNLRNEEKEKEKEKEKENNVEKICGRKQKVGPVDHGLVLSALSRALQETEHAYLDMTDKLLETNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYEPKEVDSSVESGSKGVVGVGVGVESGGGAASIVEESLGLGQSGRALKLGSEGPAQQMRLVALQLSTDHSTSIEEEIIRIKNEHPDDTQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDAVLEMFRNEYIGTAPYISCSPSLRHHRLGQRDQFMILSSDGLYQYLNNEEVVSHVESFMEKFPEGDPAQHLIEEVLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYP 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01493 696 PANTHER PROTEIN PHOSPHATASE 2C 343 694 IPR015655 GO:0004722|GO:0006470
Cca11g01493 696 PANTHER PROTEIN PHOSPHATASE 2C 29 343 694 - -
Cca11g01493 696 PANTHER PROTEIN PHOSPHATASE 2C 29 14 279 - -
Cca11g01493 696 Pfam Protein phosphatase 2C 397 454 IPR001932 -
Cca11g01493 696 Pfam Protein phosphatase 2C 518 653 IPR001932 -
Cca11g01493 696 Coils Coil 359 379 - -
Cca11g01493 696 PANTHER PROTEIN PHOSPHATASE 2C 14 279 IPR015655 GO:0004722|GO:0006470
Cca11g01493 696 SMART PP2C_4 208 682 IPR001932 -
Cca11g01493 696 MobiDBLite consensus disorder prediction 349 375 - -
Cca11g01493 696 ProSiteProfiles PPM-type phosphatase domain profile. 209 684 IPR001932 -
Cca11g01493 696 CDD PP2Cc 379 684 IPR001932 -
Cca11g01493 696 SUPERFAMILY PP2C-like 221 685 IPR036457 -
Cca11g01493 696 Gene3D - 210 691 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01493 Cca-Chr11 37790201 37796107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01493 1 695 PP2C-type Phosphatase Gene Family AT2G35350 54.229 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01493 - - gmx:100779143 1076.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01597 06 31113571 31118418 Cca11g01493 11 37790201 37796107 PCT