Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01487 ATGGCTGCTGCATCTGGCACACCTGAGTTGGAGACTCAGACGTCTTCCGGCCAAGGTGTCCATCCCAGGTTGGATGTGTATGTGTGGGACATGGATGAGACCCTTGTCCTGCTCAACTCCTTGCTTAAATCGACTTATGCCGAGGCTTTCAACGGTCTGAAGGAGGTGCGGAAGGGGGTGGAAATTGGGAGGATGTGGGAAAATCTCATTCTACAAATATGTGATGATCATTTCTTCTATGAACAAATTGAAAATTACAACAAACCTTTTCTTGATGCTCTGGCCCAATTTGATGATGGGAGGGACCTATCTGATTATGACTTCTACCAAGATGAATTAGATTCCCCACATGATGATGCCAACAAAAGAAAACTAGCATATAGGCATCGAGTCATTGCCCAAAAGTACTTACAGGGTTTAAAGAATATTTTAGATCACGAGACAATAAAACTCTGGGATGAATTGTATGATAAAACTGATGAATACACAGACAGATGGCTTTCATCAGCACGGACCTTTTTGAAGGAGTGTTCGGCTGAAGAAGATAAAGATGCAGTTTCTTCTAATGCTTCTAATGCTTTTGCTAACACTAGCTCTAACTCAACTAATGCAAAGTATCAGCATGTAAATGTTTTAGTGACATCTGGATCGTTAATTCCCTCACTTGTGAAATGCATGCTCTTTCGTTTGGACAGCTTAATAACACATGGAAATGTTTATAGCTCATGGGAAGTGGGAAAAATTCAATGTTTTCGATGGATCAAGGAGCGTTTCAACCATCCCAATGTTCGCTTTTGTGCAATTGGAGATGGATGGGAAGAGTGTGAAGCTGCAGAAATCATGAGATGGCCATTTATTAAGATTGACCCACGGCCAGGAAAACTTCACAGGTTCCCTGGTCTCACTTTGACAACAGTTAGCCACTACTTTTCTGTGGTGTATGGAAGGACAAACAATGAGAATGATGAAGAATGA 975 0.4164 MAAASGTPELETQTSSGQGVHPRLDVYVWDMDETLVLLNSLLKSTYAEAFNGLKEVRKGVEIGRMWENLILQICDDHFFYEQIENYNKPFLDALAQFDDGRDLSDYDFYQDELDSPHDDANKRKLAYRHRVIAQKYLQGLKNILDHETIKLWDELYDKTDEYTDRWLSSARTFLKECSAEEDKDAVSSNASNAFANTSSNSTNAKYQHVNVLVTSGSLIPSLVKCMLFRLDSLITHGNVYSSWEVGKIQCFRWIKERFNHPNVRFCAIGDGWEECEAAEIMRWPFIKIDPRPGKLHRFPGLTLTTVSHYFSVVYGRTNNENDEE 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01487 324 SUPERFAMILY HAD-like 28 290 IPR036412 -
Cca11g01487 324 TIGRFAM EYA-cons_domain: EYA conserved domain 25 306 IPR006545 GO:0007275
Cca11g01487 324 PANTHER DEVELOPMENTAL PROTEIN EYES ABSENT 12 315 - -
Cca11g01487 324 PANTHER EYES ABSENT 12 315 IPR028472 GO:0004725
Cca11g01487 324 Gene3D - 25 298 IPR038102 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01487 24 324 Protein tyrosine phosphatase (PTP) family AT2G35320 61.130 1.95e-140 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01487 - - gmx:100791661 582.408