Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01479 ATGAGAACCCACATGATGGAGGTGGAAAACGCGTGCGACATTGTGGAAATCGTGTCAGAGTTCGCAAGGAAGCGCCGGAGAAGGGTTTTTATCTTGAGTGGCACCAAAACTGTCACCAATCCTCCTCTGTTACACTTGGAGATGATTGAAATCCGAGGTGTGAATTGTTATTCGATTGTCACAAGCTATGGTGAAGGACACTGCCTACTATGA 213 0.4648 MRTHMMEVENACDIVEIVSEFARKRRRRVFILSGTKTVTNPPLLHLEMIEIRGVNCYSIVTSYGEGHCLL 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01479 70 ProSiteProfiles PPC domain profile profile. 1 70 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01479 Cca-Chr11 37412759 37413304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01479 1 40 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 55.000 5.81e-11 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01479 - K02316 gmx:100807581 61.2326