Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01476 ATGACaaagaagaaagagagaaggaaagagagcaaACTGAGGAGTTACCTGAAGGCGCCTTTAAGGTTCTTGACAAAGGCCAGGGACATGTACGTTCGTGGCATGATCGACTGCTCTGGCCAATTATCCTATGTGGACGCCTCCATGGGATGCCCCACTGCCCACCTTTCCACAGttcaatttgaactatacaacTATCACCTCTTGGATTCCTTGGCCTTGGCATATTTCCATGATCGGTTCTATCGTTACCTCCCACAGAAGGGTCAAGTGGTGGGAGGAAGCGTGGTTGGACTACTGGTTGCTTCGGAGCCTGTGGTGATCATGGATGCTTCGTTCAACAACACTACTTATGAAAGGCTTCTTTGGAGGATGAAGACCCTTAATGCAAGGAGGTTCAATTGGGTCACCCGGTGCAAGTGTGGTGTTGCTCAATCATTACTTATGAGAGGAGGTAATTCAACTACTCCACTTTTCCATGGTTTGCCTCCTAATCTTTCTAAATTTTGTTCAAATGTCATATGA 525 0.4305 MTKKKERRKESKLRSYLKAPLRFLTKARDMYVRGMIDCSGQLSYVDASMGCPTAHLSTVQFELYNYHLLDSLALAYFHDRFYRYLPQKGQVVGGSVVGLLVASEPVVIMDASFNNTTYERLLWRMKTLNARRFNWVTRCKCGVAQSLLMRGGNSTTPLFHGLPPNLSKFCSNVI 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01476 174 PANTHER OS07G0123800 PROTEIN 1 55 - -
Cca11g01476 174 PANTHER OS07G0123800 PROTEIN 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01476 Cca-Chr11 37372643 37374878 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01476 88 121 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 64.706 6.01e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01476 - - gmx:102662938 93.5893