Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01451 ATGCTCTCCGCTCTCCCTCCCTTGGAAAACCCGTTCTCCCCCAAAGCCCTCACTTCCAGCTCCGGTTCGGACGAGCCCAACCAGAGCCACGAAAAGAGCGGACCGGACCCCTCCGAACCGGAGCGACGGGCCGAGGAGCGGAAACGGCGGCGCATGATCTCGAACCGGGAATCGGCCCGCAGGTCGCGGATGCGGAAGCAGAGACACCTGGAGAATCTGCGGAACCAGTTGAGCAAGTGTAGGGTGGAGAACCGGGAACTGAGTAACCGGTTGCAGTTCGTGGTGCACCACTGCAACCGCGTGCGAACCGAAAACGAATGGCTCCGGTCCGAGCGAACCCTTCTCCACCAAAAAGTCTCCAACTTGACTCAAATTTTGATCTTCCAACAATTGCAACcctccttctcctcctcccctccgtctccATGGACATGCAATACTTCGCTCATCACATAA 456 0.5417 MLSALPPLENPFSPKALTSSSGSDEPNQSHEKSGPDPSEPERRAEERKRRRMISNRESARRSRMRKQRHLENLRNQLSKCRVENRELSNRLQFVVHHCNRVRTENEWLRSERTLLHQKVSNLTQILIFQQLQPSFSSSPPSPWTCNTSLIT 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01451 151 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 146 - -
Cca11g01451 151 PANTHER BZIP TRANSCRIPTION FACTOR 8 146 - -
Cca11g01451 151 MobiDBLite consensus disorder prediction 1 69 - -
Cca11g01451 151 MobiDBLite consensus disorder prediction 13 28 - -
Cca11g01451 151 Gene3D - 45 99 - -
Cca11g01451 151 SUPERFAMILY Leucine zipper domain 47 98 IPR046347 GO:0003700|GO:0006355
Cca11g01451 151 CDD bZIP_plant_GBF1 52 99 IPR045314 GO:0003700|GO:0006355
Cca11g01451 151 Pfam bZIP transcription factor 45 105 IPR004827 GO:0003700|GO:0006355
Cca11g01451 151 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 45 108 IPR004827 GO:0003700|GO:0006355
Cca11g01451 151 SMART brlzneu 43 107 IPR004827 GO:0003700|GO:0006355
Cca11g01451 151 MobiDBLite consensus disorder prediction 29 60 - -
Cca11g01451 151 Coils Coil 56 90 - -
Cca11g01451 151 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 50 65 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01451 Cca-Chr11 36763339 36764303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01451 1 130 bZIP Transcription Factor Family AT3G49760 38.298 4.86e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca11g01451 bZIP_1 2e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01451 - - gmx:100809244 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01559 06 30626065 30627932 Cca11g01451 11 36763339 36764303 PCT