Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01444 ATGAAGAAGAGGTCAGCAGACATGCAGGGGAGGGTGTTGGAGCTTGTTGAGACTCTCAAGAAGGTGAAAGGTCAAGCTCATGTTCTCGCCTCAAGGAGCTTCATCAAGTGGTCACTGCTCATGCCACTGCCTCATGTCCTCCTTGCTTGGTCCTTTCACTTCATATGTCGTTGGCTCCGAGGACACAAGGCACACAAATGCAATATTCCTCGGATTGAGGCTCCTCACAACAGCTTGCTTGCATTCAGAAGTTTAGAGTTTGCTAACAAATTAGCTTTGAAGGACAATTCTGATGTCATACCCATTATGATGAAACTGCTGATGAAGGTCTCAGGGAATTACACTCAATATGCAGTGTCAATCCTTTGGTCTGTGTGCAAGCTTGCACCTGAGGAGTTCTCTTTGTTCCATGGCTTCATTAAATTACACATGAGAGGTGGAAAGAAACAGTGA 453 0.4547 MKKRSADMQGRVLELVETLKKVKGQAHVLASRSFIKWSLLMPLPHVLLAWSFHFICRWLRGHKAHKCNIPRIEAPHNSLLAFRSLEFANKLALKDNSDVIPIMMKLLMKVSGNYTQYAVSILWSVCKLAPEEFSLFHGFIKLHMRGGKKQ 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01444 150 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 30 89 135 - -
Cca11g01444 150 PANTHER WDSAM1 PROTEIN 89 135 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01444 Cca-Chr11 36629224 36630261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01444 86 134 U-box Gene Family AT3G49810 55.102 6.01e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01444 - - adu:107487639 68.5514