Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01434 ATGGCGGCTTTCTCATGGAGCTCTCGCGCATCCCTTCCGAGCCTTCCCAAATTCTCCTACCGCCGATTCCATTCCCATCCACACCAAATCAATGTAACCCCTAAATCAATGCCAAACAATCCCTTATCATCATTAACCTCAACCTGCAAACGCTGCAACGTGTTCAGCGAAGAGTTCATCGGAGGCGTGGCGGAGGACGAGGGTTACAGCTCCATGGACGATAAGCTCTTCGTCCGTTGGTTTCGTGAGACCTGGCCTTACCTGTGGGCCCACCGTGGCGCCACCTTCGTCGTCATCGTTTCCGGTGAAATTGTCGCTAGTCCATTCCTGGATCCCATTTTAAAGGATATAGCCTTCCTTCATCACTTGGGAATCCGGTTTGTTATTGTTCCGGGGACCCATGTGCAAATTGACAACCTTTTGCGTGAGAGAGGGTGCCAGCCTAAGTATAATGGTACATATAGGATAACTGATGATGAGTCTCTAGCAGCTGCAATGGAAGCAGCTGGGAGAATAAGGTTGATGATTGAAGCAAAACTTTCTCCTGGGCCCTCCATTTGCAATGTCCGACGACATGGTGATAATAGCCGTTTGCATGAAGTTAGTGTTAGTGTTGCCAGTGGGAACTTTCTTGCAGCCAAGAGAAGAGGAGTTGTCAAAGGAATTGATTATGGATCAACTGGGGAGGTTAAAAAAGTAGATGTTTCTCGCATGCGAGAGAGGCTTGATGGCGATTGTATTGTTATTTTAAGCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAATACTTATGAAGTTGCAACAGCTTGTGCCTTGGCTATAGGAGCAGACAAGCTTATATGTGTTATAGATGGTCCGATACTTGATGAGAGTGGCCACCTTATTCGTTTCTTGACCCTTCAAGAGGCAGACATGCTAATTCGTAAACGGGTTGAGCAAAGTGAAACAGCTGCTAACTATGTGAAAGCTGTTGATGAAGAAAGTTTCAACTCTCTTAACAATTTTAATGGGGCAGTCCATTCAACACAGAATGGAAAACCATTTTCAGAATCTCATCAGGCTACCTTTCATAATGGTGTTGGTTTTGACAATGGTAATGGCCTGTGGTCTGGGGAGCAAGGTTTTGCTATTGGAGGTCAGGAGTGGCTAAGTCGAATGAATGGTTACCTGTCAGAACTGGCTGCTGCAGCCTTCGTTTGTAGAGGTGGTGTTCAAAGAGTTCATTTGTTGGATGGAACTATTAGTGGAGTTCTATTGTTGGAATTGTTTAAGAGAGATGGGATGGGAACAATGGTAGCTAGTGACCTTTATGAAGGCACCCGGATGGCTCAAGTAACAGATATTTCTGGAATAAAACAACTTATCCAGCCATTGGAGGAGTCTGGCATATTAGTTAAGCGGACTAATGAAGAGCTTCTCCAATCGTTAAGCTCCTTCGTTGTTGTGGAAAGAGAAGGTCAAATAATTGCTTGCGCTGCACTTTTTCCTTTCTTTGAGGAGAAGTGTGGAGAGGTTGCTGCAATTGCAGTATCTCCCGATTGTAGAGGTCAAGGACAGGGGGACAAATTACTTGATTACATAGAGAAGAAGGCTTCATCTCTTGGATTTGAAATGCTTTTCTTGCTCACAACTCGTACGGCAGATTGGTAA 1659 0.4503 MAAFSWSSRASLPSLPKFSYRRFHSHPHQINVTPKSMPNNPLSSLTSTCKRCNVFSEEFIGGVAEDEGYSSMDDKLFVRWFRETWPYLWAHRGATFVVIVSGEIVASPFLDPILKDIAFLHHLGIRFVIVPGTHVQIDNLLRERGCQPKYNGTYRITDDESLAAAMEAAGRIRLMIEAKLSPGPSICNVRRHGDNSRLHEVSVSVASGNFLAAKRRGVVKGIDYGSTGEVKKVDVSRMRERLDGDCIVILSNLGYSSSGEVLNCNTYEVATACALAIGADKLICVIDGPILDESGHLIRFLTLQEADMLIRKRVEQSETAANYVKAVDEESFNSLNNFNGAVHSTQNGKPFSESHQATFHNGVGFDNGNGLWSGEQGFAIGGQEWLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDISGIKQLIQPLEESGILVKRTNEELLQSLSSFVVVEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYIEKKASSLGFEMLFLLTTRTADW 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01434 552 PIRSF ArgA 68 552 IPR010167 GO:0004042|GO:0005737|GO:0006526
Cca11g01434 552 Pfam Amino acid kinase family 97 319 IPR001048 -
Cca11g01434 552 Gene3D - 75 440 IPR036393 -
Cca11g01434 552 SUPERFAMILY Carbamate kinase-like 77 312 IPR036393 -
Cca11g01434 552 Pfam Acetyltransferase (GNAT) family 480 544 IPR000182 GO:0016407
Cca11g01434 552 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 444 547 IPR016181 -
Cca11g01434 552 Hamap Amino-acid acetyltransferase [argA]. 70 552 IPR010167 GO:0004042|GO:0005737|GO:0006526
Cca11g01434 552 SUPERFAMILY Carbamate kinase-like 389 437 IPR036393 -
Cca11g01434 552 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 441 552 IPR000182 GO:0016407
Cca11g01434 552 PANTHER AMINO-ACID ACETYLTRANSFERASE 40 552 IPR010167 GO:0004042|GO:0005737|GO:0006526
Cca11g01434 552 CDD AAK_NAGS-ABP 77 435 IPR033719 -
Cca11g01434 552 Gene3D - 441 552 - -
Cca11g01434 552 CDD NAT_SF 482 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01434 Cca-Chr11 36445572 36457410 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Cca11g01434 AA_kinase 1.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01434 K14682 - gmx:100800925 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01548 06 30515923 30521468 Cca11g01434 11 36445572 36457410 PCT