Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01407 ATGGGTCGGCTTAATCTCCTACTTGTGTGCTCACTTACATTAACACTCTCCCTTTACCTACACCCAACCCATGCCCAGCTTAGTCCAAACCACTATGCTAACACATGCCCCAATGTTGAAACCATAGTTAGAGATGTCGTTAGGAAGAAGTTCCAACAAACCTTTGTCACTGTTCCAGCCACCCTTCGTCTCTTCTTTCACGATTGCTTTGTCCAGGGTTGTGATGCTTCCGTTATGGTGGCGTCCACTGGAAATAACCAAGCAGAGAAGGATCACCCAGACAATCTATCCTTGGCGGGTGATGGGTTTGACACAGTGATCAAAGCAAAAGCTGCATTAGATGCTGTTCCTCAGTGCAAGAACAAAGTCTCGTGTGCTGATATTCTTGCCTTGGCTACCCGTGATGTTATTGCACTGGCTGGTGGACCTTCATACAGGGTTGAATTGGGAAGATTTGATGGGCTAGTTTCAAGAGCTTCGGATGTGAATGGGAGGCTTCCTCAGCCAACCTTTAATTTGAATCAGCTGAATTCACTGTTTGCGGCAAACGGGCTTACCCAAACTGACATGATTGCTCTATCAGGTGCACACACCCTAGGATTCTCCCACTGCAACAGGTTCTCCAATAGAATATACAGCAGCCCAGTGGACCCAACACTGAACAAGGGCTACGCGGCCCAATTGCAACAAATGTGCCCACGGAACGTGGATCCAAGGATTGCCATCAACATGGACCCAACCACTCCTCGAACGTTCGACAACGTTTATTACCAAAACCTTCAACAAGGGAAGGGCCTCTTCACCTCGGACCAAATCCTCTTCACGGACCCAAGGTCCAGGAGCACCGTTAACTCCTTTGCTTCTAGTAGCGGCGTTTTCAACGCTAACTTCGTTTCTGCTATTACCAAATTGGGCCGCGTTGGAGTCAAGACTGCAAGAAACGGCAAAATTCGTACCGATTGCTCCGTGCTTTAA 975 0.4821 MGRLNLLLVCSLTLTLSLYLHPTHAQLSPNHYANTCPNVETIVRDVVRKKFQQTFVTVPATLRLFFHDCFVQGCDASVMVASTGNNQAEKDHPDNLSLAGDGFDTVIKAKAALDAVPQCKNKVSCADILALATRDVIALAGGPSYRVELGRFDGLVSRASDVNGRLPQPTFNLNQLNSLFAANGLTQTDMIALSGAHTLGFSHCNRFSNRIYSSPVDPTLNKGYAAQLQQMCPRNVDPRIAINMDPTTPRTFDNVYYQNLQQGKGLFTSDQILFTDPRSRSTVNSFASSSGVFNANFVSAITKLGRVGVKTARNGKIRTDCSVL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01407 324 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Cca11g01407 324 Pfam Peroxidase 43 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g01407 324 Gene3D Peroxidase, domain 2 167 304 - -
Cca11g01407 324 PANTHER - 1 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01407 324 SUPERFAMILY Heme-dependent peroxidases 26 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca11g01407 324 ProSiteProfiles Plant heme peroxidase family profile. 26 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g01407 324 Gene3D - 30 323 - -
Cca11g01407 324 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g01407 324 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g01407 324 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g01407 324 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g01407 324 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g01407 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Cca11g01407 324 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01407 324 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01407 324 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01407 324 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01407 324 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01407 324 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01407 324 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01407 324 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01407 324 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01407 324 CDD secretory_peroxidase 26 323 IPR033905 GO:0004601|GO:0042744
Cca11g01407 324 PANTHER PEROXIDASE 1 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01407 Cca-Chr11 35972052 35974734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01407 1 324 Peroxidase AT5G67400 68.293 9.17e-169 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01407 K00430 - gmx:100819937 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01407 11 35972052 35974734 Cca06g01524 06 30203103 30205440 PCT