Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01396 ATGGGTTCCTTTCGCCAGCCTCTCCTCGCACTTCTCTCGCTTCTGCTCCTGGGTCTCTCCGGTGCGGCGGAACCGGAGAGGACCACTTACATTGTGCACGTGGCCAAATCGGAAATGCCGGAGGCCTTCGAGCACCACACCGTGTGGTACCAGTCGTCGCTGAAATCCGTGTCGGACTCCGCGGAAATGATATACACCTACGACAACGCCATCCACGGTTACGCGACTAGGCTAACCGCGGAGGAAGCGCGTCTGCTGGAGACCCAAGAGGGGATTCTGGCGGTGTTGCCGGAGGCCAGGTACGAGCTTCACACCACAAGGACGCCTCTGTTCCTCGGACTTGACAAAAGCGCGGACATGTTCCCCGATTCGAGTTCCGCGAGTGACGTCATTATCGGAGTCCTCGACACGGGTGTTTGGCCCGAGAGTAAAAGCTTCGACGACGCTGGACTTGGGCCTATTCCTAGTGGGTGGAAAGGCGAGTGCGAAACGGGCACCAATTTCACCGCCAAAAACTGTAACAGAAAGTTGATCGGAGCTAGGTATTTCGTCAGCGGTTGCGAAGCCATGCTTGGTCCGATTAACGAGACGGAGGAGTCTAGGTCGCCGCGTGACGACGACGGCCACGGCACCCACACCGCCAGCACCGCGGCGGGGTCGGTTGTTTCCGGCGCGAGTTTGTTCGGCTACGCGGCCGGGACGGCGCGTGGGATGGCGACGCGCGCGAGAGTGGCTGTTTACAAGGTTTGCTGGAAGGGAGGGTGTTTCAGCTCCGACATTCTGGCGGCGATTGATAAGGCGATCGCGGACAACGTGAATGTATTGTCGTTGTCGCTGGGTGGTGGAGTGGCTGATTATTTCAGAGACCACGTAGCTATCGGAGCTTTTTCTGCGATGGAGAAAGGGATTTTGGTTTCTTGCTCCGCTGGGAACGCGGGTCCTACTTCCGGGAGTCTCTCCAATGTGGCTCCATGGATTACTACGGTAGGGGCTGGCACACTGGATCGTGATTTCCCTGCTTATGTTTCACTCGGGAATGGGCTTAACTACTCCGGCGTGTCGCTTTACAGGGGTAGCGCTTTGCCAGATTCTCCTTTACCTTTTGTCTACGCAGGGAATGCTAGCAACGCCACCAATGGGAACTTGTGCGTCACGGGAACGCTGTCTCCGGAGAAGGTCGCCGGGAAGATAGTGTTATGCGACCGTGGGTTAACTGCTAGGGTTCAGAAAGGTTCGGTGGTGAAATCCGCCGGAGGATTGGGCATGGTGTTGAGCAACACCGCCGCCAACGGCGAGGAGCTGGTGGCCGACGCTCATCTCTTGCCGGCGACCGCGGTTGGGGAGAAAGCCGGTGACGCAATTAAGAAGTACTTGTTCACCTCAGCCAAACCGACGGTGAAGATTGTGTTCGAGGGAACGAAGGTGGGGATTCAGCCATCCCCCGTGGTCGCTGCGTTCAGCTCGCGTGGTCCAAACTCGATCACGCCGCAGATCTTGAAACCCGATCTGATCGCGCCAGGTGTCAACATCTTAGCGGGGTGGTCGAAGTCCGTGGGCCCCACGGGGTTGCCCGTTGATGGGAGGCGCGTGGATTTCAACATCATCTCTGGCACGTCCATGTCGTGCCCTCACGTGAGCGGTCTAGCCGCGCTGATCAAGTCGGCTCACCCTGAGTGGAGCCCAGCCGCGGTTCGTTCGGCTCTCATGACAACGGCTTACACCGTTTACAAGACCGGTGCCAAGTTGCAAGACAGTGCAACGGGTAAACCCTCCACGCCGTTGGATCACGGTTCCGGACACGTGGACCCTGTTGCCGCCCTTAATCCAGGGCTGGTCTACGATCTTAGCGTGGATGATTATCTTGGTTTTCTCTGCGCGTTGAATTACTCATCCTCAGATTTCTTAACCCTGGCCAGGAGAAAGTTCCAGTGCGACGCGAGCAGGCGGTACAGTGTGAGCGAGCTGAACTACCCTTCGTTTGGGGTGGTGTTTGGATCAGGGTCGAGCGTGGTTAAACACACGCGTACCCTGACGAACGTGGGACCCGCTGGGACCTACAAGGCTTCAGTGACGTCAGAGAACTCATCCGTGAAAATCTCGGTTGAGCCGCAAGTGTTGAGTTTCAAGGAAAATGAGAAAAAATCATTCAGCATCACGTTTTCGTCATCGGGTTCGCCCCAGAGAGTAAATGCTTTTGGTTTTGGACGGTTGGAGTGGTCTGATGGGAAGCACGTGGTTGGAACCCCGATTTCAATTAATTGGGATTGA 2268 0.5679 MGSFRQPLLALLSLLLLGLSGAAEPERTTYIVHVAKSEMPEAFEHHTVWYQSSLKSVSDSAEMIYTYDNAIHGYATRLTAEEARLLETQEGILAVLPEARYELHTTRTPLFLGLDKSADMFPDSSSASDVIIGVLDTGVWPESKSFDDAGLGPIPSGWKGECETGTNFTAKNCNRKLIGARYFVSGCEAMLGPINETEESRSPRDDDGHGTHTASTAAGSVVSGASLFGYAAGTARGMATRARVAVYKVCWKGGCFSSDILAAIDKAIADNVNVLSLSLGGGVADYFRDHVAIGAFSAMEKGILVSCSAGNAGPTSGSLSNVAPWITTVGAGTLDRDFPAYVSLGNGLNYSGVSLYRGSALPDSPLPFVYAGNASNATNGNLCVTGTLSPEKVAGKIVLCDRGLTARVQKGSVVKSAGGLGMVLSNTAANGEELVADAHLLPATAVGEKAGDAIKKYLFTSAKPTVKIVFEGTKVGIQPSPVVAAFSSRGPNSITPQILKPDLIAPGVNILAGWSKSVGPTGLPVDGRRVDFNIISGTSMSCPHVSGLAALIKSAHPEWSPAAVRSALMTTAYTVYKTGAKLQDSATGKPSTPLDHGSGHVDPVAALNPGLVYDLSVDDYLGFLCALNYSSSDFLTLARRKFQCDASRRYSVSELNYPSFGVVFGSGSSVVKHTRTLTNVGPAGTYKASVTSENSSVKISVEPQVLSFKENEKKSFSITFSSSGSPQRVNAFGFGRLEWSDGKHVVGTPISINWD 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01396 755 Pfam Subtilase family 128 578 IPR000209 GO:0006508|GO:0008236
Cca11g01396 755 ProSiteProfiles Serine proteases, subtilase domain profile. 100 607 - -
Cca11g01396 755 ProSitePatterns Serine proteases, subtilase family, serine active site. 537 547 IPR023828 -
Cca11g01396 755 CDD Peptidases_S8_3 101 573 IPR034197 -
Cca11g01396 755 SUPERFAMILY Subtilisin-like 103 611 IPR036852 GO:0004252|GO:0006508
Cca11g01396 755 MobiDBLite consensus disorder prediction 196 216 - -
Cca11g01396 755 Gene3D - 335 476 - -
Cca11g01396 755 Gene3D - 624 754 - -
Cca11g01396 755 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Cca11g01396 755 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Cca11g01396 755 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Cca11g01396 755 CDD PA_subtilisin_like 341 468 - -
Cca11g01396 755 Pfam Fibronectin type-III domain 654 752 IPR041469 -
Cca11g01396 755 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 19 753 - -
Cca11g01396 755 Pfam PA domain 381 454 IPR003137 -
Cca11g01396 755 Gene3D Peptidase S8/S53 domain 129 620 IPR036852 GO:0004252|GO:0006508
Cca11g01396 755 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 753 IPR045051 -
Cca11g01396 755 Pfam Peptidase inhibitor I9 29 104 IPR010259 -
Cca11g01396 755 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 104 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01396 Cca-Chr11 35814890 35818286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01396 10 754 Subtilisin-like Serine Gene Family AT5G67360 71.600 0.0 1107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01396 - - gmx:100815413 1251.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01514 06 30110775 30113090 Cca11g01396 11 35814890 35818286 PCT