Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01382 ATGACGCATAAAACGATTACTCTGAATCTCAAGTTTCCCCATGTGTCAACGGAAGCGCCCAAGCGCGACCAATGGCAGTGGGAAAACGTCGCCGCTGGCGCCGCCGCCGGATTCACCACCGTCGCCGTTATACACCCACTCGATGTTGTCCGAACTAGGTTCCAAGTTAACGATGGTCGAGTCTCTCACCTTCCTATTTACAAGAACACTGCTCACGCCATTTTCACCATTGCTCGCTCCGAGGGTTTAAGAGGATTATATGCAGGCTTTCTTCCTGGGGTTCTGGGGTCAACTATTTCATTGGGTTTATATTTCTTTTTCTATGACAAAGCCAAACAAAGATATGCTAGGAACAGGGACGGAAAGTTGAGTCCAGGTCTTCATCTTGCTTCAGCTGCTGAAGCAGGAGCTTTGGTTTCCTTGTGTACAAATCCTGTGTGGCTAGTAAAGACAAGATTGCAGCTTCAAACTCCTCTTCATCAGAGACGACCATACTCTGGGATTTATGATGCATTTAGAACCATAATGAGGGAGGAAGGATTTAGTGCACTTTACAGGGGAATTGTTCCTGGTCTATTTCTGCAGGTGTCTCATGGTGCTATTAAGTTAACAGCCTACGAAGAGCTACGCAAAGTTACTGTTGATTTTAAGAGTAAGCGAAGTACACTCCATAATCAAAACCCTGATAACTTACTGAATTCTGTTGATTATGCTGTTCTTGGAGCAACATCAAAACTTGCGGCAATACTTCTAACCTATCCTTTTCAGGTTATACGTTCACGATTGCAGCAACGGCCTAGTGGTGATGGGGTTCCAAGATATATGGACACTTGGCATGTTGTGAAAGAAACTGCACGATACGAAGGTGTCCGAGGTTTTTACAAAGGAATTACCCCAAACCTCTTGAAAAATGCTCCTGCTTCTTCAATAACATTTATTGTTTATGAAAATGTCCTAAAATTGCTTAAATCGGCAAGGAGGAATGACTGA 990 0.4394 MTHKTITLNLKFPHVSTEAPKRDQWQWENVAAGAAAGFTTVAVIHPLDVVRTRFQVNDGRVSHLPIYKNTAHAIFTIARSEGLRGLYAGFLPGVLGSTISLGLYFFFYDKAKQRYARNRDGKLSPGLHLASAAEAGALVSLCTNPVWLVKTRLQLQTPLHQRRPYSGIYDAFRTIMREEGFSALYRGIVPGLFLQVSHGAIKLTAYEELRKVTVDFKSKRSTLHNQNPDNLLNSVDYAVLGATSKLAAILLTYPFQVIRSRLQQRPSGDGVPRYMDTWHVVKETARYEGVRGFYKGITPNLLKNAPASSITFIVYENVLKLLKSARRND 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01382 329 PANTHER BNAA09G07970D PROTEIN 24 324 - -
Cca11g01382 329 SUPERFAMILY Mitochondrial carrier 27 317 IPR023395 -
Cca11g01382 329 Pfam Mitochondrial carrier protein 123 213 IPR018108 -
Cca11g01382 329 Pfam Mitochondrial carrier protein 235 324 IPR018108 -
Cca11g01382 329 Pfam Mitochondrial carrier protein 25 118 IPR018108 -
Cca11g01382 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 212 IPR018108 -
Cca11g01382 329 PRINTS Mitochondrial carrier protein signature 39 57 IPR002067 GO:0055085
Cca11g01382 329 PRINTS Mitochondrial carrier protein signature 87 105 IPR002067 GO:0055085
Cca11g01382 329 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Cca11g01382 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 321 IPR018108 -
Cca11g01382 329 Gene3D Mitochondrial carrier domain 7 120 IPR023395 -
Cca11g01382 329 Gene3D Mitochondrial carrier domain 121 327 IPR023395 -
Cca11g01382 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 24 114 IPR018108 -
Cca11g01382 329 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 24 324 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01382 Cca-Chr11 35632034 35642139 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01382 44 322 Chloroplast and Mitochondria Gene Families AT2G47490 37.895 1.67e-44 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01382 K15115 - gmx:100809599 570.081